RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 GJA1P17302 382 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 ANXA13P27216 316 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 GABRR2P28476 465 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 CDC25CP30307 473 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 USP46P62068 366 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 TEAD2Q15562 447 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 TAF12Q16514 161 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 CLEC20AQ6ZU45 233 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 LIMD1Q9UGP4 676 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 KIAA1257Q9ULG3 409 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 PCDHB4Q9Y5E5 795 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 GREB1Q4ZG55 1949 aa17.84■□□□□ 0.45
RPL28-209ENST00000560055 ANHXE9PGG2 379 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 PES1O00541 588 aaKnown RBP17.83■□□□□ 0.44
RPL28-209ENST00000560055 GPR37L1O60883 481 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 TPM2P07951 284 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 CDK11BP21127 795 aaKnown RBP17.83■□□□□ 0.44
RPL28-209ENST00000560055 ADORA2BP29275 332 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 MFAP3P55082 362 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 RBBP8NLQ8NC74 664 aaPredicted RBP17.83■□□□□ 0.44
RPL28-209ENST00000560055 SHC3Q92529 594 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 ZSWIM3Q96MP5 696 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 DUSP16Q9BY84 665 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 IL37Q9NZH6 218 aa17.83■□□□□ 0.44
RPL28-209ENST00000560055 UXTQ9UBK9 157 aaPredicted RBP17.83■□□□□ 0.44
RPL28-209ENST00000560055 AJAP1Q9UKB5 411 aaPredicted RBP17.83■□□□□ 0.44
RPL28-209ENST00000560055 MAGED2Q9UNF1 606 aaPredicted RBP17.83■□□□□ 0.44
RPL28-209ENST00000560055 FAM92AA1XBS5 289 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 BECN2A8MW95 431 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 HHLA1C9JL84 531 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 O00370 1275 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 VDRP11473 427 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 NPR3P17342 541 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 MAP3K7CLP57077 242 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 HTR4Q13639 388 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 SGO2Q562F6 1265 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 STXBP5Q5T5C0 1151 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 KLHDC7AQ5VTJ3 777 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 LUZP1Q86V48 1076 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 TTC30AQ86WT1 665 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 NUP93Q8N1F7 819 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 TFAP2BQ92481 460 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 NXPE3Q969Y0 559 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 MCRS1Q96EZ8 462 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 ZSWIM1Q9BR11 485 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 NAA15Q9BXJ9 866 aaKnown RBP17.82■□□□□ 0.44
RPL28-209ENST00000560055 ATXN3LQ9H3M9 355 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 KCNK12Q9HB15 430 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 PNPLA8Q9NP80 782 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 EHD2Q9NZN4 543 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 DNAJC12Q9UKB3 198 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 SIK3Q9Y2K2 1263 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 MYO10Q9HD67 2058 aa17.82■□□□□ 0.44
RPL28-209ENST00000560055 ASGR2P07307 311 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 RFX1P22670 979 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 SLC5A3P53794 718 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 CYP4F8P98187 520 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 PKDCCQ504Y2 493 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 FKBP15Q5T1M5 1219 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 ANKRD52Q8NB46 1076 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 FGF14Q92915 247 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 ASB16Q96NS5 453 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 GCNAQ96QF7 691 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
RPL28-209ENST00000560055 GPR88Q9GZN0 384 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 TRPV4Q9HBA0 871 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 IGSF9Q9P2J2 1179 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 MUTYHQ9UIF7 546 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 TSPAN16Q9UKR8 245 aa17.81■□□□□ 0.44
RPL28-209ENST00000560055 SOBPA7XYQ1 873 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 DCXO43602 365 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
RPL28-209ENST00000560055 KRT5P13647 590 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 ALADP13716 330 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 UCHL3P15374 230 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 CD19P15391 556 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 FCARP24071 287 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 DDX6P26196 483 aaKnown RBP eCLIP17.8■□□□□ 0.446e-34■□□□□ 11.2
RPL28-209ENST00000560055 KLK7P49862 253 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 PTPN21Q16825 1174 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 ARHGAP44Q17R89 818 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 GOLGA7BQ2TAP0 167 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 FAM78AQ5JUQ0 283 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 LRSAM1Q6UWE0 723 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 PARM1Q6UWI2 310 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 LCLAT1Q6UWP7 414 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 MTSS1LQ765P7 747 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 GPRIN1Q7Z2K8 1008 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 ERGIC2Q96RQ1 377 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 GANQ9H2C0 597 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 TASP1Q9H6P5 420 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 COMMD8Q9NX08 183 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 ZMYM5Q9UJ78 669 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPL28-209ENST00000560055 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 NUMBLQ9Y6R0 609 aa17.8■□□□□ 0.44
RPL28-209ENST00000560055 PATJQ8NI35 1801 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms