RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 DLL3Q9NYJ7 618 aa13.08□□□□□ -0.32
SPG11-219ENST00000559822 GCNT4Q9P109 453 aa13.08□□□□□ -0.32
SPG11-219ENST00000559822 ARHGAP26Q9UNA1 814 aa13.08□□□□□ -0.32
SPG11-219ENST00000559822 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.32
SPG11-219ENST00000559822 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 KIF20AO95235 890 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 NFATC1O95644 943 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 P4HA1P13674 534 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 GJA4P35212 333 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 KRT85P78386 507 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 RSPO4Q2I0M5 234 aaPredicted RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 CEP68Q76N32 757 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 WDR5BQ86VZ2 330 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 SLC9A9Q8IVB4 645 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 KIAA1958Q8N8K9 716 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 ARL14EPQ8N8R7 260 aaPredicted RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 B3GALNT2Q8NCR0 500 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 TTC16Q8NEE8 873 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 SH3RF2Q8TEC5 729 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 TMEM174Q8WUU8 243 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 PAGE5Q96GU1 130 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 TNIP3Q96KP6 325 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 CYP2S1Q96SQ9 504 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 NXF1Q9UBU9 619 aaKnown RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 SERTAD1Q9UHV2 236 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 CDV3Q9UKY7 258 aaKnown RBP13.07□□□□□ -0.32
SPG11-219ENST00000559822 WDR87Q6ZQQ6 2873 aa13.07□□□□□ -0.32
SPG11-219ENST00000559822 PTPRDP23468 1912 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 C2orf78A6NCI8 922 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 OTOL1A6NHN0 477 aaPredicted RBP13.06□□□□□ -0.32
SPG11-219ENST00000559822 F8VP50 259 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 PDXKO00764 312 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
SPG11-219ENST00000559822 ACTN4O43707 911 aaKnown RBP13.06□□□□□ -0.32
SPG11-219ENST00000559822 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
SPG11-219ENST00000559822 TRIM21P19474 475 aaKnown RBP13.06□□□□□ -0.32
SPG11-219ENST00000559822 CMA1P23946 247 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 MYL6P60660 151 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 STK4Q13043 487 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 NCOA4Q13772 614 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 LPAL2Q16609 132 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 EML3Q32P44 896 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 GRAMD1CQ8IYS0 662 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 CAMKK1Q8N5S9 505 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 PDZD8Q8NEN9 1154 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 RIN3Q8TB24 985 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 ZNF516Q92618 1163 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 CD101Q93033 1021 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 ACDQ96AP0 544 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 SPATA32Q96LK8 384 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 SLC22A12Q96S37 553 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 WNT6Q9Y6F9 365 aa13.06□□□□□ -0.32
SPG11-219ENST00000559822 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 HRO43593 1189 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 KLRC4O43908 158 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 RNF40O75150 1001 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 AKAP3O75969 853 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 EGFP01133 1207 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 RPN1P04843 607 aaKnown RBP13.05□□□□□ -0.32
SPG11-219ENST00000559822 PFKFB1P16118 471 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 GALK1P51570 392 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 USP46P62068 366 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 CLDN10P78369 228 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 SLC7A9P82251 487 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 DMWDQ09019 674 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 PKP1Q13835 747 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 KMT5BQ4FZB7 885 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 DDX42Q86XP3 938 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPG11-219ENST00000559822 NUP93Q8N1F7 819 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 KIAA0895Q8NCT3 520 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
SPG11-219ENST00000559822 DMAC2Q9NW81 257 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 FRMD4BQ9Y2L6 1034 aa13.05□□□□□ -0.32
SPG11-219ENST00000559822 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
SPG11-219ENST00000559822 A0A1B0GVL5 298 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 LRRIQ3A6PVS8 624 aaPredicted RBP13.04□□□□□ -0.32
SPG11-219ENST00000559822 LEFTY2O00292 366 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 CALUO43852 315 aaPredicted RBP13.04□□□□□ -0.32
SPG11-219ENST00000559822 ABL1P00519 1130 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 NR3C1P04150 777 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 TGM1P22735 817 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 YWHAQP27348 245 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 SYKP43405 635 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 CASP4P49662 377 aa13.04□□□□□ -0.32
SPG11-219ENST00000559822 SPEM2Q0P670 501 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms