RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 PSMG2Q969U7 264 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 TMX3Q96JJ7 454 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 LPIN3Q9BQK8 851 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 STRA6Q9BX79 667 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 FAM126AQ9BYI3 521 aaPredicted RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 TMLHEQ9NVH6 421 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 GTSE1Q9NYZ3 720 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 LARSQ9P2J5 1176 aaKnown RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 NCDNQ9UBB6 729 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 ODF2LQ9ULJ1 636 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 MRPS17Q9Y2R5 130 aaKnown RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 STYXL1Q9Y6J8 313 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 TCHHQ07283 1943 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 CHURC1-FNTBB4DL54 471 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 K7ENM7 598 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 ZNF263O14978 683 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 HNRNPDLO14979 420 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 HMGA1P17096 107 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 PLCG1P19174 1290 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 GABRR2P28476 465 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 GJB2P29033 226 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 MARCKSP29966 332 aaPredicted RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 WEE1P30291 646 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 CXCL12P48061 93 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 FNTBP49356 437 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 ACOT2P49753 483 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 LIG4P49917 911 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 CCR3P51677 355 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 CYP4F8P98187 520 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 KCNA1Q09470 495 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 SPEM2Q0P670 501 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 DHX8Q14562 1220 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 KARSQ15046 597 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 LPAL2Q16609 132 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 CCDC142Q17RM4 750 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 SLC39A12Q504Y0 691 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 DSTYKQ6XUX3 929 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 GPBP1Q86WP2 473 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 EFCAB13Q8IY85 973 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 ELMOD1Q8N336 334 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 SPEM1Q8N4L4 309 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 MYCT1Q8N699 235 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 CELF5Q8N6W0 485 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 STKLD1Q8NE28 680 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 TTC8Q8TAM2 541 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 RAD54LQ92698 747 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 FAM83CQ9BQN1 747 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 IER2Q9BTL4 223 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 MSTO1Q9BUK6 570 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 SLC46A2Q9BY10 475 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 FGFBP2Q9BYJ0 223 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 GPR88Q9GZN0 384 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 SMG9Q9H0W8 520 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 ST6GALNAC4Q9H4F1 302 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 RPF1Q9H9Y2 349 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 HPS4Q9NQG7 708 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 POLR3BQ9NW08 1133 aaPredicted RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 HSFX1Q9UBD0 423 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 ADGRE2Q9UHX3 823 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 KCNG1Q9UIX4 513 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 CCL26Q9Y258 94 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.27□□□□□ -1.41
USP3-215ENST00000559771 GREB1Q4ZG55 1949 aa6.27□□□□□ -1.41
USP3-215ENST00000559771 H0YCG3 227 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 KHNYNO15037 678 aaKnown RBP6.26□□□□□ -1.41
USP3-215ENST00000559771 SLC26A4O43511 780 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 EXTL3O43909 919 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 HAPLN1P10915 354 aaPredicted RBP6.26□□□□□ -1.41
USP3-215ENST00000559771 ODC1P11926 461 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 FSTP19883 344 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 HOXA6P31267 233 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 MATR3P43243 847 aaKnown RBP eCLIP6.26□□□□□ -1.413e-6■■□□□ 13.9
USP3-215ENST00000559771 ALDH1A3P47895 512 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 GPR15P49685 360 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 CASP5P51878 434 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 EPHB3P54753 998 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 NRLP54845 237 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 LMNB2Q03252 620 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 PLD1Q13393 1074 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 TMEM132DQ14C87 1099 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 PON2Q15165 354 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 PTPAQ15257 358 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 RABEP1Q15276 862 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 GPR158Q5T848 1215 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 WSCD1Q658N2 575 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 NAIF1Q69YI7 327 aaPredicted RBP6.26□□□□□ -1.41
USP3-215ENST00000559771 LAIR1Q6GTX8 287 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 FSTL4Q6MZW2 842 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 ZNF720Q7Z2F6 126 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 USP37Q86T82 979 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 RALGPS2Q86X27 583 aaPredicted RBP6.26□□□□□ -1.41
USP3-215ENST00000559771 CD302Q8IX05 232 aa6.26□□□□□ -1.41
USP3-215ENST00000559771 EZH1Q92800 747 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms