RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 ZXDBP98169 803 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 GAB4Q2WGN9 574 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 BRAPQ7Z569 592 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 SYCP3Q8IZU3 236 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 CCDC33Q8N5R6 958 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 MDGA1Q8NFP4 955 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 SPATA17Q96L03 361 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 SYT15Q9BQS2 421 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 CCDC39Q9UFE4 941 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 ZMIZ1Q9ULJ6 1067 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 WASF3Q9UPY6 502 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 ATRXP46100 2492 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 MYH10P35580 1976 aa17.39■□□□□ 0.37
CDC42BPB-205ENST00000559245 ZFYVE26Q68DK2 2539 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 LEFTY2O00292 366 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CD2BP2O95400 341 aaKnown RBP17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CEACAM1P13688 526 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 PFKLP17858 780 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 SPINK2P20155 84 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CSRP1P21291 193 aaKnown RBP17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 LMO2P25791 158 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 GRIK1P39086 918 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CASP5P51878 434 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 USP46P62068 366 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 PSMC1P62191 440 aaKnown RBP17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 IRX4P78413 519 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 MYO1EQ12965 1108 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CRY1Q16526 586 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 ERICH6BQ5W0A0 696 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 LMBRD2Q68DH5 695 aaPredicted RBP17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 VSTM1Q6UX27 236 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 SV2BQ7L1I2 683 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 DPH6Q7L8W6 267 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 TTC30AQ86WT1 665 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 KBTBD7Q8WVZ9 684 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 MYLPFQ96A32 169 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 PCIF1Q9H4Z3 704 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 OLFML3Q9NRN5 406 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 TRPM5Q9NZQ8 1165 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CDH9Q9ULB4 789 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 WDFY3Q8IZQ1 3526 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 CACNA1EQ15878 2313 aa17.38■□□□□ 0.37
CDC42BPB-205ENST00000559245 ALDH1A2O94788 518 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 TOP3BO95985 862 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 CYP17A1P05093 508 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 HNRNPLP14866 589 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 BDNFP23560 247 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 MRPS21P82921 87 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 UAP1L1Q3KQV9 507 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 RRAGBQ5VZM2 374 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 TMEM92Q6UXU6 159 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 DENND5BQ6ZUT9 1274 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 LIMS2Q7Z4I7 341 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 FILIP1Q7Z7B0 1213 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 KDF1Q8NAX2 398 aaPredicted RBP17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 OLIG1Q8TAK6 271 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 PIGKQ92643 395 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 ANKRD36BP1Q96IX9 119 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 CEP295NLQ96MC4 621 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 ADAM33Q9BZ11 813 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 CRTAC1Q9NQ79 661 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 INTS13Q9NVM9 706 aa17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-205ENST00000559245 IDEP14735 1019 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 ANXA13P27216 316 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 SLC7A9P82251 487 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 CYP27A1Q02318 531 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 ALCAMQ13740 583 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 MAPRE1Q15691 268 aaKnown RBP17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 ADGRG2Q8IZP9 1017 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 GPD1LQ8N335 351 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 ALLCQ8N6M5 410 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 HPDLQ96IR7 371 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 TTLL2Q9BWV7 592 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 TMEM121BQ9BXQ6 578 aaPredicted RBP17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 RNF38Q9H0F5 515 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 EVLQ9UI08 416 aaPredicted RBP17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 PTPRJQ12913 1337 aa17.36■□□□□ 0.37
CDC42BPB-205ENST00000559245 SPEGQ15772 3267 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 ZNF840PA6NDX5 716 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 PDGFRBP09619 1106 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 P2RY2P41231 377 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 SLC6A11P48066 632 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 MESP2Q0VG99 397 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 DHCR24Q15392 516 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 TRIM61Q5EBN2 209 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 SFTPA1Q8IWL2 248 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 KIAA1958Q8N8K9 716 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 IL17RCQ8NAC3 791 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 TXNDC5Q8NBS9 432 aaKnown RBP17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 DEFB124Q8NES8 71 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 OR5B17Q8NGF7 314 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 RLN3Q8WXF3 142 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 PCED1BQ96HM7 432 aa17.35■□□□□ 0.37
CDC42BPB-205ENST00000559245 SPACA7Q96KW9 195 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms