RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MIPP30301 263 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 RAD23BP54727 409 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 OSTNP61366 133 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 LRRC71Q8N4P6 559 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 KCTD6Q8NC69 237 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 HSPH1Q92598 858 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 ALKBH8Q96BT7 664 aaKnown RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 MAF1Q9H063 256 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 SDCBP2Q9H190 292 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 VPS11Q9H270 941 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 TLE6Q9H808 572 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 MANSC1Q9H8J5 431 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 ALG13Q9NP73 1137 aaKnown RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 LNPEPQ9UIQ6 1025 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 TSHRP16473 764 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 PROZP22891 400 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 PTPN4P29074 926 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 CDC25CP30307 473 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 RASSF2P50749 326 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 CDH8P55286 799 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 DPYSL3Q14195 570 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 IER5Q5VY09 327 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 CMASQ8NFW8 434 aaPredicted RBP17.35■□□□□ 0.37
SPG11-215ENST00000559193 STK32AQ8WU08 396 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 SAR1AQ9NR31 198 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 HOXC10Q9NYD6 342 aa17.35■□□□□ 0.37
SPG11-215ENST00000559193 SSC5DA1L4H1 1573 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 MCF2LO15068 1137 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 MED7O43513 233 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 TNNC2P02585 160 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 RBP3P10745 1247 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 ELK3P41970 407 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 CDR2LQ86X02 465 aaPredicted RBP17.34■□□□□ 0.37
SPG11-215ENST00000559193 ZBTB8OSQ8IWT0 167 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 ANKRD36BP1Q96IX9 119 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 SERAC1Q96JX3 654 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 TWNKQ96RR1 684 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 CYTH2Q99418 400 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 MIPEPQ99797 713 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 BCO2Q9BYV7 579 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 SYNCQ9H7C4 482 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 HMGXB4Q9UGU5 601 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 SMAPO00193 183 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 B4GALT4O60513 344 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 TRUB2O95900 331 aaKnown RBP17.34■□□□□ 0.37
SPG11-215ENST00000559193 DHRS4L1P0CG22 281 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 MARK3P27448 753 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 NEK3P51956 506 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 MPZL3Q6UWV2 235 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 NPNTQ6UXI9 565 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 LRRC6Q86X45 466 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 SPATA18Q8TC71 538 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 PEBP4Q96S96 227 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 CALN1Q9BXU9 219 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 DENND2DQ9H6A0 471 aaPredicted RBP17.34■□□□□ 0.37
SPG11-215ENST00000559193 PTPRHQ9HD43 1115 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 WDR35Q9P2L0 1181 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 SIX4Q9UIU6 781 aa17.34■□□□□ 0.37
SPG11-215ENST00000559193 TCRBV9S1A1TA0A576 114 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 KBTBD13C9JR72 458 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 B4GALT5O43286 388 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 MT-ND3P03897 115 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 MMRN1Q13201 1228 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 PTK7Q13308 1070 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 WASHC2DQ5SRD0 308 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 FAM182AQ5T1J6 154 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 EEF1DP3Q658K8 133 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 TRIM50Q86XT4 487 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 TMEM192Q8IY95 271 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 ENDOVQ8N8Q3 282 aaKnown RBP17.33■□□□□ 0.36
SPG11-215ENST00000559193 TTC8Q8TAM2 541 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 ZNF668Q96K58 619 aaPredicted RBP17.33■□□□□ 0.36
SPG11-215ENST00000559193 USP18Q9UMW8 372 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 A0A0G2JND7 137 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 ZBTB42B2RXF5 422 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 LPXNO60711 386 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 KRT19P08727 400 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 EDNRBP24530 442 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 ETV4P43268 484 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 TAF11Q15544 211 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 KBTBD12Q3ZCT8 623 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 TSHZ1Q6ZSZ6 1077 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 SH2D5Q6ZV89 423 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 SLC4A11Q8NBS3 891 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 SLC44A1Q8WWI5 657 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 SEPT1Q8WYJ6 367 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 MCRS1Q96EZ8 462 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 NUDCD1Q96RS6 583 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 TSSK1BQ9BXA7 367 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 SMYD3Q9H7B4 428 aa17.33■□□□□ 0.36
SPG11-215ENST00000559193 SOWAHBA6NEL2 793 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ROR1Q01973 937 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 KCNJ11Q14654 390 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 ZNF667Q5HYK9 610 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 SYCP2LQ5T4T6 812 aa17.32■□□□□ 0.36
SPG11-215ENST00000559193 CHSY1Q86X52 802 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms