RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TPM2P07951 284 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 RHOP08100 348 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 BMP1P13497 986 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 CYP11B1P15538 503 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 CEBPBP17676 345 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 GNA15P30679 374 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 SOX5P35711 763 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 GRIK1P39086 918 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 TUFMP49411 452 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 TPM4P67936 248 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 ITIH3Q06033 890 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 CBX2Q14781 532 aaPredicted RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 MAPRE1Q15691 268 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 SGO2Q562F6 1265 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 LCLAT1Q6UWP7 414 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 VSTM1Q6UX27 236 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 BHLHA9Q7RTU4 235 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 PASD1Q8IV76 773 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 VSTM4Q8IW00 320 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 TTC39CQ8N584 583 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 SHKBP1Q8TBC3 707 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 EPS8L1Q8TE68 723 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 ZNF606Q8WXB4 792 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 NDRG1Q92597 394 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 SECISBP2LQ93073 1101 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 ZSWIM3Q96MP5 696 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 MYADMQ96S97 322 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 SYT11Q9BT88 431 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 DUSP16Q9BY84 665 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 WDR6Q9NNW5 1121 aaKnown RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 DMAP1Q9NPF5 467 aaPredicted RBP11.54□□□□□ -0.56
TPM1-217ENST00000559108 COL4A3Q01955 1670 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 COL4A2P08572 1712 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 PIK3R2O00459 728 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 F11P03951 625 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 FAM200BP0CF97 657 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 SRGAP2BP0DMP2 458 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 MYL4P12829 197 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 NPR3P17342 541 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 RFX1P22670 979 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 ZNF75DP51815 510 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 SLC5A3P53794 718 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 CYP4F8P98187 520 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 CNGA2Q16280 664 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 FILIP1LQ4L180 1135 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 PMF1Q6P1K2 205 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 IRF2BP2Q7Z5L9 587 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 ANKRD52Q8NB46 1076 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 SPATA17Q96L03 361 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 MYRFLQ96LU7 910 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 PCDHB18PQ96TA0 734 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 TTLL2Q9BWV7 592 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 IL37Q9NZH6 218 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 ITIH6Q6UXX5 1313 aa11.53□□□□□ -0.56
TPM1-217ENST00000559108 A0A1W2PRU2 124 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 FAM92AA1XBS5 289 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 M0QYV0 167 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 THAP12O43422 761 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 SLC34A2O95436 690 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 MMEP08473 750 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 PTPN2P17706 415 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 GPD2P43304 727 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 ALDH1A3P47895 512 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 RGS7P49802 495 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 EPHB3P54753 998 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 RPL10AP62906 217 aaKnown RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 IFRD2Q12894 506 aaPredicted RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 TBX2Q13207 712 aaPredicted RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 TEAD2Q15562 447 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 RAB41Q5JT25 222 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 TAF3Q5VWG9 929 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 RTL10Q7L3V2 364 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 GET4Q7L5D6 327 aaPredicted RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM1-217ENST00000559108 NPAS3Q8IXF0 933 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 RIN3Q8TB24 985 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 CLEC4CQ8WTT0 213 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 SLC35F5Q8WV83 523 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 RSPRY1Q96DX4 576 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 ASB2Q96Q27 587 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 SLC22A12Q96S37 553 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 PIDD1Q9HB75 910 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 AVENQ9NQS1 362 aaPredicted RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 OSER1Q9NX31 292 aa11.52□□□□□ -0.57
TPM1-217ENST00000559108 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.57
TPM1-217ENST00000559108 MYO10Q9HD67 2058 aa11.51□□□□□ -0.57
TPM1-217ENST00000559108 TRIM66O15016 1216 aa11.51□□□□□ -0.57
TPM1-217ENST00000559108 XYLBO75191 536 aa11.51□□□□□ -0.57
TPM1-217ENST00000559108 PLEKP08567 350 aaPredicted RBP11.51□□□□□ -0.57
TPM1-217ENST00000559108 TRIM21P19474 475 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms