RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SIX6OS1Q8N1H7 587 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 TTC9BQ8N6N2 239 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 EFHBQ8N7U6 833 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 C1orf131Q8NDD1 294 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC112Q8NEF3 446 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 IPO4Q8TEX9 1081 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC22A17Q8WUG5 538 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 DDX1Q92499 740 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 PDLIM2Q96JY6 352 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 C8orf48Q96LL4 319 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC42Q96M95 316 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 SMOQ99835 787 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 BAG1Q99933 345 aaPredicted RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 LHX5Q9H2C1 402 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 LRRC4Q9HBW1 653 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 PNPLA8Q9NP80 782 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 ST7Q9NRC1 585 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 ARHGAP20Q9P2F6 1191 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 MYO7AQ13402 2215 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 TMCO5BA8MYB1 307 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CCL16O15467 120 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 RFPL2O75678 378 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 RTN3O95197 1032 aaPredicted RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 IPO7O95373 1038 aaKnown RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PLEKP08567 350 aaPredicted RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CFHP08603 1231 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 HNRNPA1P09651 372 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CSH1P0DML2 217 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CSH2P0DML3 217 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ATF6P18850 670 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 HOXA9P31269 272 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CYLC1P35663 651 aaPredicted RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GPD2P43304 727 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ACADSBP45954 432 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PLA2G4AP47712 749 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GPR15P49685 360 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 RGS7P49802 495 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 SLC5A3P53794 718 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CACNA2D1P54289 1103 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 NOMO3P69849 1222 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CDK17Q00537 523 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PDCLQ13371 301 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 SKIV2LQ15477 1246 aaKnown RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CLEC16AQ2KHT3 1053 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PKDCCQ504Y2 493 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 SDHAF4Q5VUM1 108 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 NAA35Q5VZE5 725 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 DENND5BQ6ZUT9 1274 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PIGZQ86VD9 579 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ERICH1Q86X53 443 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 TMTC1Q8IUR5 882 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ZMIZ2Q8NF64 920 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GPR152Q8TDT2 470 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GIPC2Q8TF65 315 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PPP1R13BQ96KQ4 1090 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 SPATA17Q96L03 361 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 HSFY1Q96LI6 401 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CEP295NLQ96MC4 621 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ZNF512Q96ME7 567 aaPredicted RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GUCD1Q96NT3 240 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 GCNAQ96QF7 691 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 KCNK16Q96T55 309 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CHP1Q99653 195 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 SYT11Q9BT88 431 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 UBXN6Q9BZV1 441 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 MIS12Q9H081 205 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 SFXN1Q9H9B4 322 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 NHEJ1Q9H9Q4 299 aaPredicted RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 PIDD1Q9HB75 910 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CSNK1G1Q9HCP0 422 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 TMEM30AQ9NV96 361 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ZDHHC7Q9NXF8 308 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CLDND1Q9NY35 253 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 EHD2Q9NZN4 543 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 MAGED2Q9UNF1 606 aaPredicted RBP6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 ASB3Q9Y575 518 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 MYO9BQ13459 2157 aa6.96□□□□□ -1.3
CHRNA3-204ENST00000559002 CDH23Q9H251 3354 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 PRRC2BQ5JSZ5 2229 aaKnown RBP6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 CCDC195A0A1B0GUA6 201 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 FAM170AA1A519 330 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 SLC38A8A6NNN8 435 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 E5RJQ4 531 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 TULP2O00295 520 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 DDX3XO00571 662 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 LINC01565O15544 149 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 SART1O43290 800 aaKnown RBP6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 BEST1O76090 585 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 FBXO21O94952 628 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 GLP2RO95838 553 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 CYP1A1P04798 512 aaPredicted RBP6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 CALB1P05937 261 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 POU2F2P09086 479 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 LCP1P13796 627 aa6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 HOXB8P17481 243 aaPredicted RBP6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 CDH5P33151 784 aaPredicted RBP6.95□□□□□ -1.3
CHRNA3-204ENST00000559002 TKTL1P51854 596 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms