RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ARSAP15289 507 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 RAP1GAPP47736 663 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 GALK1P51570 392 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 STK4Q13043 487 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
CASC4-205ENST00000558735 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 VSTM1Q6UX27 236 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 HS2ST1Q7LGA3 356 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 C12orf56Q8IXR9 622 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 MYLPFQ96A32 169 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 PAGE5Q96GU1 130 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 PCED1BQ96HM7 432 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 FNBP1Q96RU3 617 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 CGRRF1Q99675 332 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
CASC4-205ENST00000558735 ANKRD11Q6UB99 2663 aaPredicted RBP12.31□□□□□ -0.44
CASC4-205ENST00000558735 C2orf78A6NCI8 922 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 ACTN4O43707 911 aaKnown RBP12.3□□□□□ -0.44
CASC4-205ENST00000558735 EPN2O95208 641 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 PTPN1P18031 435 aaKnown RBP12.3□□□□□ -0.44
CASC4-205ENST00000558735 HDCP19113 662 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 GRIK1P39086 918 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 CASP4P49662 377 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 MYL6P60660 151 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 USP46P62068 366 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 MAPRE1Q15691 268 aaKnown RBP12.3□□□□□ -0.44
CASC4-205ENST00000558735 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 FSTL4Q6MZW2 842 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
CASC4-205ENST00000558735 PKN3Q6P5Z2 889 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 ARL14EPQ8N8R7 260 aaPredicted RBP12.3□□□□□ -0.44
CASC4-205ENST00000558735 OR6B3Q8NGW1 331 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
CASC4-205ENST00000558735 XYLT2Q9H1B5 865 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 LINC00597Q9H2U6 94 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 TRPC7Q9HCX4 862 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 DMAC2Q9NW81 257 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 ZDHHC9Q9Y397 364 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 PCDHGA5Q9Y5G8 931 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 UBE4BO95155 1302 aa12.3□□□□□ -0.44
CASC4-205ENST00000558735 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 ZFYVE26Q68DK2 2539 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 TRAV19A0A0A6YYK7 116 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 EXOC3O60645 756 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 AKAP3O75969 853 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 STAU1O95793 577 aaKnown RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 CMA1P23946 247 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 GJA4P35212 333 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 CLDN10P78369 228 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 ZXDBP98169 803 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 MTF1Q14872 753 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 ZNF77Q15935 545 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 AASDHQ4L235 1098 aaPredicted RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 STPG1Q5TH74 334 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 NAIF1Q69YI7 327 aaPredicted RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 HEATR6Q6AI08 1181 aaKnown RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 CEP68Q76N32 757 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 FSIP1Q8NA03 581 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 KIAA0895Q8NCT3 520 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 PARD3BQ8TEW8 1205 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 GAB3Q8WWW8 586 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 ZC3H10Q96K80 434 aaKnown RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 CEP295NLQ96MC4 621 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 RNF38Q9H0F5 515 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 DPEP3Q9H4B8 488 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 ECT2Q9H8V3 914 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 TMEM30AQ9NV96 361 aa12.29□□□□□ -0.44
CASC4-205ENST00000558735 NUP210Q8TEM1 1887 aaPredicted RBP12.29□□□□□ -0.44
CASC4-205ENST00000558735 DMXL2Q8TDJ6 3036 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 A0A1B0GVL5 298 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 F8VP50 259 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 CLDN5O00501 218 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 EGFP01133 1207 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 CKMP06732 381 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 ATICP31939 592 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 CDH8P55286 799 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 GRSF1Q12849 480 aaKnown RBP eCLIP12.28□□□□□ -0.44
CASC4-205ENST00000558735 PSMD2Q13200 908 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 TRPC3Q13507 836 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 SF3A2Q15428 464 aaKnown RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 EML3Q32P44 896 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 CACNA2D4Q7Z3S7 1137 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 SLC9A9Q8IVB4 645 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms