RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 ST7Q9NRC1 585 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 PCDHGC3Q9UN70 934 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 BZW2Q9Y6E2 419 aaKnown RBP13.24□□□□□ -0.29
CCDC33-205ENST00000558659 ARHGEF37A1IGU5 675 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 H7C4K7 107 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 MTMR3Q13615 1198 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
CCDC33-205ENST00000558659 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 PIGZQ86VD9 579 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 SCN4BQ8IWT1 228 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 SEPT5Q99719 369 aaPredicted RBP13.24□□□□□ -0.29
CCDC33-205ENST00000558659 C11orf70Q9BRQ4 267 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
CCDC33-205ENST00000558659 RXFP1Q9HBX9 757 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 TRMT1Q9NXH9 659 aaKnown RBP13.24□□□□□ -0.29
CCDC33-205ENST00000558659 LZTS1Q9Y250 596 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 RWDD3Q9Y3V2 267 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
CCDC33-205ENST00000558659 MYH10P35580 1976 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 BRWD1Q9NSI6 2320 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 FSCN2O14926 492 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 ARHGAP6O43182 974 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 ABLIM3O94929 683 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 NPR3P17342 541 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 KLRC2P26717 231 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 PGFP49763 221 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 TAF5Q15542 800 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 LRIT3Q3SXY7 679 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 MGAT5BQ3V5L5 792 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 SCUBE3Q8IX30 993 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 ZNF461Q8TAF7 563 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 GIPC2Q8TF65 315 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 ANKRD7Q92527 254 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 ARHGEF26Q96DR7 871 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 THAP2Q9H0W7 228 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 SALL4Q9UJQ4 1053 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 KIAA1257Q9ULG3 409 aa13.23□□□□□ -0.29
CCDC33-205ENST00000558659 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 E5RJQ4 531 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 MED7O43513 233 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 ERBB2P04626 1255 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 FAM200BP0CF97 657 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 GRIK1P39086 918 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
CCDC33-205ENST00000558659 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 PDCLQ13371 301 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 ZNF677Q86XU0 584 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 CCDC170Q8IYT3 715 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 DCP1BQ8IZD4 617 aaKnown RBP13.22□□□□□ -0.29
CCDC33-205ENST00000558659 MIS12Q9H081 205 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 CYP4F11Q9HBI6 524 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 HESX1Q9UBX0 185 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 DOCK6Q96HP0 2047 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
CCDC33-205ENST00000558659 LCP1P13796 627 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 ATF2P15336 505 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 EPCAMP16422 314 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 ATF6P18850 670 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 GALCP54803 685 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 USP46P62068 366 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 CENPCQ03188 943 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 RAB33AQ14088 237 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 CFAP221Q4G0U5 840 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
CCDC33-205ENST00000558659 TRIM7Q9C029 511 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 LHX5Q9H2C1 402 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 IRAK3Q9Y616 596 aa13.22□□□□□ -0.29
CCDC33-205ENST00000558659 LCA5LO95447 670 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 RRM1P23921 792 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 CDH5P33151 784 aaPredicted RBP13.21□□□□□ -0.29
CCDC33-205ENST00000558659 CYLC1P35663 651 aaPredicted RBP13.21□□□□□ -0.29
CCDC33-205ENST00000558659 MAGEA1P43355 309 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 BST2Q10589 180 aaKnown RBP13.21□□□□□ -0.29
CCDC33-205ENST00000558659 ADGRE1Q14246 886 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
CCDC33-205ENST00000558659 ZNF697Q5TEC3 545 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 LILRA6Q6PI73 481 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 MON1BQ7L1V2 547 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 TMEM35BQ8NCS4 154 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 PPP1R13BQ96KQ4 1090 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 ISCUQ9H1K1 167 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 FNIP2Q9P278 1114 aa13.21□□□□□ -0.29
CCDC33-205ENST00000558659 NRG2O14511 850 aaPredicted RBP13.21□□□□□ -0.3
CCDC33-205ENST00000558659 RFPL2O75678 378 aa13.21□□□□□ -0.3
CCDC33-205ENST00000558659 GRAP2O75791 330 aa13.21□□□□□ -0.3
CCDC33-205ENST00000558659 MMP8P22894 467 aa13.21□□□□□ -0.3
CCDC33-205ENST00000558659 NSFP46459 744 aaKnown RBP13.21□□□□□ -0.3
CCDC33-205ENST00000558659 CLCN4P51793 760 aa13.21□□□□□ -0.3
CCDC33-205ENST00000558659 BCAT1P54687 386 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms