RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ANHXE9PGG2 379 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 BEST1O76090 585 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 CD19P15391 556 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
SMAD3-205ENST00000558428 PON1P27169 355 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ZNF165P49910 485 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 MFAP3P55082 362 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 USP46P62068 366 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 APBA1Q02410 837 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 TDGQ13569 410 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ZSCAN23Q3MJ62 389 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 GJB7Q6PEY0 223 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 TMEM150AQ86TG1 271 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 NUP93Q8N1F7 819 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ZMIZ2Q8NF64 920 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ZSCAN18Q8TBC5 510 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-205ENST00000558428 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
SMAD3-205ENST00000558428 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ZSWIM3Q96MP5 696 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 KREMEN1Q96MU8 473 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 ASB16Q96NS5 453 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 EPHX3Q9H6B9 360 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 CSNK1G1Q9HCP0 422 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 EHD2Q9NZN4 543 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 APEX2Q9UBZ4 518 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
SMAD3-205ENST00000558428 TECTAO75443 2155 aa13.08□□□□□ -0.31
SMAD3-205ENST00000558428 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-205ENST00000558428 TADA3O75528 432 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-205ENST00000558428 VDRP11473 427 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 KRT5P13647 590 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 ZNF18P17022 549 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 NPR3P17342 541 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.321e-5■■■□□ 17.8
SMAD3-205ENST00000558428 SLC5A3P53794 718 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 ZXDAP98168 799 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 ARHGAP17Q68EM7 881 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 DHX40Q8IX18 779 aaKnown RBP13.08□□□□□ -0.32
SMAD3-205ENST00000558428 SLC44A3Q8N4M1 653 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 RBBP8NLQ8NC74 664 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-205ENST00000558428 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 RPP25Q9BUL9 199 aaKnown RBP13.08□□□□□ -0.32
SMAD3-205ENST00000558428 TTLL2Q9BWV7 592 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 DUSP16Q9BY84 665 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 ZFP14Q9HCL3 533 aa13.08□□□□□ -0.32
SMAD3-205ENST00000558428 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.32
SMAD3-205ENST00000558428 BECN2A8MW95 431 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 ECI2O75521 394 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 PAEPP09466 180 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 FCARP24071 287 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 YWHAQP27348 245 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 COPB1P53618 953 aaKnown RBP13.07□□□□□ -0.32
SMAD3-205ENST00000558428 KCNMA1Q12791 1236 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TAF10Q12962 218 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 GOLGA7BQ2TAP0 167 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 FKBP15Q5T1M5 1219 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TXNDC8Q6A555 127 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TANGO2Q6ICL3 276 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 ARID3BQ8IVW6 561 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-205ENST00000558428 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 SCAMP5Q8TAC9 235 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 EDAQ92838 391 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 FBXO32Q969P5 355 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 SLITRK1Q96PX8 696 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TRPC7Q9HCX4 862 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 HESX1Q9UBX0 185 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 ZMYM5Q9UJ78 669 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 KIAA1257Q9ULG3 409 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 DUSP12Q9UNI6 340 aa13.07□□□□□ -0.32
SMAD3-205ENST00000558428 DPYSL4O14531 572 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 NARSO43776 548 aaKnown RBP13.06□□□□□ -0.32
SMAD3-205ENST00000558428 ABL1P00519 1130 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 ATP1A3P13637 1013 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
SMAD3-205ENST00000558428 USP8P40818 1118 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 VIPR2P41587 438 aa13.06□□□□□ -0.32
SMAD3-205ENST00000558428 PPP3CCP48454 512 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms