RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 KLHL38Q2WGJ6 581 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 DCAF4L1Q3SXM0 396 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 CCDC38Q502W7 563 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 FAM47CQ5HY64 1035 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 JADE1Q6IE81 842 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 USP50Q70EL3 339 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 ARMCX2Q7L311 632 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 ZNF410Q86VK4 478 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 LINC01465Q8N7H1 131 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 ATP11CQ8NB49 1132 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SLC4A11Q8NBS3 891 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 PPTC7Q8NI37 304 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 AFG1LQ8WV93 481 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 RSAD2Q8WXG1 361 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 OPTNQ96CV9 577 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 CDCA5Q96FF9 252 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 C9orf72Q96LT7 481 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 OSBPL7Q9BZF2 842 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 PDZD7Q9H5P4 517 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 RSAD1Q9HA92 442 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 TXNRD2Q9NNW7 524 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 METTL5Q9NRN9 209 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 DNAJC17Q9NVM6 304 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 EURLQ9NYK6 297 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SIX4Q9UIU6 781 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 BARX2Q9UMQ3 279 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 NAALADL1Q9UQQ1 740 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 DERAQ9Y315 318 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 USP15Q9Y4E8 981 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 C3orf70A6NLC5 250 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 RASA4BC9J798 803 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 APOC4-APOC2K7ER74 178 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 M0QYV0 167 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 GPR25O00155 361 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 RASA4O43374 803 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 HRO43593 1189 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SNX3O60493 162 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 PEX10O60683 326 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 DDNO94850 711 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 OAS1P00973 400 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 APOC2P02655 101 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SETSIPP0DME0 302 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 INSRRP14616 1297 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 RAP1GAPP47736 663 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 CDC42EP1Q00587 391 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 OTUD4Q01804 1114 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 MYO1EQ12965 1108 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 TFDP2Q14188 446 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 ATP13A4Q4VNC1 1196 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 CYP4F22Q6NT55 531 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 TRPM8Q7Z2W7 1104 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 VSIG1Q86XK7 387 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 RFX6Q8HWS3 928 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 MAP7D3Q8IWC1 876 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SRRM1Q8IYB3 904 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 ANKRD42Q8N9B4 389 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 KCTD6Q8NC69 237 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 TRAPPC12Q8WVT3 735 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 PRCCQ92733 491 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 KCTD12Q96CX2 325 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 HPDLQ96IR7 371 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SMC6Q96SB8 1091 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 FAM118BQ9BPY3 351 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 ELAC2Q9BQ52 826 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 FRMD8Q9BZ67 464 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 FHDC1Q9C0D6 1143 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SMYD3Q9H7B4 428 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 IFT122Q9HBG6 1241 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SSU72Q9NP77 194 aaKnown RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 TMEM51Q9NW97 253 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 PSMC3IPQ9P2W1 217 aaPredicted RBP7.62□□□□□ -1.19
VPS13C-206ENST00000558338 AKT3Q9Y243 479 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 SLC45A1Q9Y2W3 748 aa7.62□□□□□ -1.19
VPS13C-206ENST00000558338 MCM3APO60318 1980 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 MGAMO43451 1857 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 CFAP69A5D8W1 941 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 TCP11X1B4DZS4 312 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 TK2O00142 265 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 CST8O60676 142 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 SPAG6O75602 509 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 IFNB1P01574 187 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 ERBB2P04626 1255 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 TCF4P15884 667 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 GPD1P21695 349 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 HNRNPH1P31943 449 aaKnown RBP7.61□□□□□ -1.19
VPS13C-206ENST00000558338 GBP2P32456 591 aaPredicted RBP7.61□□□□□ -1.19
VPS13C-206ENST00000558338 CTCFP49711 727 aaPredicted RBP7.61□□□□□ -1.19
VPS13C-206ENST00000558338 ZNF143P52747 638 aaPredicted RBP7.61□□□□□ -1.19
VPS13C-206ENST00000558338 XRCC4Q13426 336 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 MOGSQ13724 837 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 SPARCL1Q14515 664 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 PCBP1Q15365 356 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS13C-206ENST00000558338 CCDC142Q17RM4 750 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 FAM102AQ5T9C2 384 aaPredicted RBP7.61□□□□□ -1.19
VPS13C-206ENST00000558338 FBXW10Q5XX13 1052 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 NUGGCQ68CJ6 796 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 SPATA21Q7Z572 469 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 TRABD2AQ86V40 505 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 CEP120Q8N960 986 aa7.61□□□□□ -1.19
VPS13C-206ENST00000558338 CMASQ8NFW8 434 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms