RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SRGNP10124 158 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 PSMB9P28065 219 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 RPS7P62081 194 aaKnown RBP14.46□□□□□ -0.1
SPG11-210ENST00000558319 NEDD8Q15843 81 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 DDI2Q5TDH0 399 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 GPAT2Q6NUI2 795 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 CENPLQ8N0S6 344 aaPredicted RBP14.46□□□□□ -0.1
SPG11-210ENST00000558319 RDM1Q8NG50 284 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 TSPAN17Q96FV3 270 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 POP1Q99575 1024 aaKnown RBP14.46□□□□□ -0.1
SPG11-210ENST00000558319 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 APEX2Q9UBZ4 518 aa14.46□□□□□ -0.1
SPG11-210ENST00000558319 ADGRL3Q9HAR2 1447 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 TRIM49D1C9J1S8 452 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 MLNP12872 115 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 ALOX12P18054 663 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 DGKKQ5KSL6 1271 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 ARMC4Q5T2S8 1044 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 OLFML1Q6UWY5 402 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 SYTL1Q8IYJ3 562 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 SPATA18Q8TC71 538 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 CAPSLQ8WWF8 208 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 TAAR1Q96RJ0 339 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 TIMM13Q9Y5L4 95 aaPredicted RBP14.45□□□□□ -0.1
SPG11-210ENST00000558319 FLT1P17948 1338 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 EVPLLA8MZ36 301 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 CDH18Q13634 790 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 ZSWIM7Q19AV6 140 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 ZNF70Q9UC06 446 aaPredicted RBP14.45□□□□□ -0.1
SPG11-210ENST00000558319 CYP2C9P11712 490 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 GSSP48637 474 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 KRT77Q7Z794 578 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 KLF15Q9UIH9 416 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 UBXN8O00124 270 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 SPRP35270 261 aaPredicted RBP14.45□□□□□ -0.1
SPG11-210ENST00000558319 CSNK2BP67870 215 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 TCHHL1Q5QJ38 904 aaPredicted RBP14.45□□□□□ -0.1
SPG11-210ENST00000558319 NUDT18Q6ZVK8 323 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 TNIP2Q8NFZ5 429 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 TRIM39Q9HCM9 518 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 RPAP1Q9BWH6 1393 aaPredicted RBP14.45□□□□□ -0.1
SPG11-210ENST00000558319 NDUFB10O96000 172 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 IL12RB1P42701 662 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 KRR1Q13601 381 aaKnown RBP14.45□□□□□ -0.1
SPG11-210ENST00000558319 STOX1Q6ZVD7 989 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 DAGLAQ9Y4D2 1042 aa14.45□□□□□ -0.1
SPG11-210ENST00000558319 CLASP2O75122 1294 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 ZNF286BP0CG31 522 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 KLRK1P26718 216 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 RAD21L1Q9H4I0 556 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 CASTOR2A6NHX0 329 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 FNTAP49354 379 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 ADARP55265 1226 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 LRRC8DQ7L1W4 858 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 LINC00116Q8NCU8 138 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 PARVBQ9HBI1 364 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 MAN1C1Q9NR34 630 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 USP20Q9Y2K6 914 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 ARHGEF12Q9NZN5 1544 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 CDHR2Q9BYE9 1310 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 GH1P01241 217 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 FGFR1P11362 822 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 UCHL3P15374 230 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 COILP38432 576 aaPredicted RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 TRAF2Q12933 501 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 SEMA4DQ92854 862 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 TMEM237Q96Q45 408 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 CCSER1Q9C0I3 900 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 CPSF4O95639 269 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 BCL10O95999 233 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 MT-CO1P00395 513 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 FGFR2P21802 821 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 TCF7P36402 384 aaPredicted RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 RFC5P40937 340 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 HARS2P49590 506 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 NANOGNBQ7Z5D8 188 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 SUGP1Q8IWZ8 645 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 TMEM120AQ9BXJ8 343 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 STK39Q9UEW8 545 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 ATP6V1HQ9UI12 483 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 IQCA1LA6NCM1 817 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 GYPCP04921 128 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 IL5RAQ01344 420 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 CINPQ9BW66 212 aaPredicted RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 VTA1Q9NP79 307 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 RUVBL2Q9Y230 463 aaKnown RBP14.44□□□□□ -0.1
SPG11-210ENST00000558319 CHKBQ9Y259 395 aa14.44□□□□□ -0.1
SPG11-210ENST00000558319 E9PBE3 544 aa14.43□□□□□ -0.1
SPG11-210ENST00000558319 KLHL41O60662 606 aa14.43□□□□□ -0.1
SPG11-210ENST00000558319 POLBP06746 335 aa14.43□□□□□ -0.1
SPG11-210ENST00000558319 ABCB1P08183 1280 aaPredicted RBP14.43□□□□□ -0.1
SPG11-210ENST00000558319 PLEKP08567 350 aaPredicted RBP14.43□□□□□ -0.1
SPG11-210ENST00000558319 PLCL1Q15111 1095 aa14.43□□□□□ -0.1
SPG11-210ENST00000558319 NAB2Q15742 525 aa14.43□□□□□ -0.1
SPG11-210ENST00000558319 KCTD19Q17RG1 926 aaPredicted RBP14.43□□□□□ -0.1
SPG11-210ENST00000558319 ZNF57Q68EA5 555 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms