RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TRDMT1O14717 391 aaKnown RBP16.57■□□□□ 0.24
TPM1-211ENST00000558314 TRIM66O15016 1216 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 AXIN1O15169 862 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 ATG13O75143 517 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 PTPN1P18031 435 aaKnown RBP16.57■□□□□ 0.24
TPM1-211ENST00000558314 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 CCDC6Q16204 474 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 KNOP1Q1ED39 458 aaKnown RBP16.57■□□□□ 0.24
TPM1-211ENST00000558314 CNNM4Q6P4Q7 775 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 MYCBPAPQ8TBZ2 947 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 ATP2A3Q93084 1043 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 EXOC4Q96A65 974 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 HHIPQ96QV1 700 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 ZNF518BQ9C0D4 1074 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 LINC00597Q9H2U6 94 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.57■□□□□ 0.24
TPM1-211ENST00000558314 DLL3Q9NYJ7 618 aa16.57■□□□□ 0.24
TPM1-211ENST00000558314 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.56■□□□□ 0.24
TPM1-211ENST00000558314 PVALEFA0A1B0GWK0 134 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 SOBPA7XYQ1 873 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 PRR5-ARHGAP8B1AHC4 643 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 CNR2P34972 360 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 ATXN1P54253 815 aaKnown RBP16.56■□□□□ 0.24
TPM1-211ENST00000558314 CDH8P55286 799 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 SEC13P55735 322 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 ARHGAP8P85298 464 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 USP4Q13107 963 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 NR1H3Q13133 447 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 ZNF699Q32M78 642 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
TPM1-211ENST00000558314 LIMS2Q7Z4I7 341 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 WDR5BQ86VZ2 330 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 FAM160A2Q8N612 972 aaPredicted RBP16.56■□□□□ 0.24
TPM1-211ENST00000558314 RPLP0P6Q8NHW5 317 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 CD101Q93033 1021 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
TPM1-211ENST00000558314 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 SPATA17Q96L03 361 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 SMYD3Q9H7B4 428 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 SEMA4GQ9NTN9 838 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 GCNT4Q9P109 453 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
TPM1-211ENST00000558314 OBSL1O75147 1896 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 LEFTY2O00292 366 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 TACC1O75410 805 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 RPP40O75818 363 aaKnown RBP16.55■□□□□ 0.24
TPM1-211ENST00000558314 PAPSS2O95340 614 aaPredicted RBP16.55■□□□□ 0.24
TPM1-211ENST00000558314 DRD1P21728 446 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 SDHBP21912 280 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 TGM1P22735 817 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 CACNA2D1P54289 1103 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
TPM1-211ENST00000558314 EHHADHQ08426 723 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 TAF10Q12962 218 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 EML3Q32P44 896 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 TTC30AQ86WT1 665 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 PLEKHO2Q8TD55 490 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 EHD2Q9NZN4 543 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 CPQQ9Y646 472 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 DENND4CQ5VZ89 1909 aa16.55■□□□□ 0.24
TPM1-211ENST00000558314 LRRIQ3A6PVS8 624 aaPredicted RBP16.54■□□□□ 0.24
TPM1-211ENST00000558314 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 MBL2P11226 248 aaPredicted RBP16.54■□□□□ 0.24
TPM1-211ENST00000558314 PDE6CP51160 858 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 STK4Q13043 487 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 ORC1Q13415 861 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 BMT2Q1RMZ1 405 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 KMT5BQ4FZB7 885 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 B3GALNT2Q8NCR0 500 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 C8orf48Q96LL4 319 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 B3GNT5Q9BYG0 378 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 ELOVL4Q9GZR5 314 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 ARRDC1-AS1Q9H2J1 176 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
TPM1-211ENST00000558314 ARHGAP26Q9UNA1 814 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 FRYLO94915 3013 aa16.54■□□□□ 0.24
TPM1-211ENST00000558314 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 ZNF840PA6NDX5 716 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 ACTN4O43707 911 aaKnown RBP16.53■□□□□ 0.24
TPM1-211ENST00000558314 NFATC1O95644 943 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
TPM1-211ENST00000558314 PFKFB1P16118 471 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 ATICP31939 592 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 NCOA4Q13772 614 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 AASDHQ4L235 1098 aaPredicted RBP16.53■□□□□ 0.24
TPM1-211ENST00000558314 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 PRR23CQ6ZRP0 262 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 GOLGA5Q8TBA6 731 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 FBXO32Q969P5 355 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 SLITRK1Q96PX8 696 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 RNF38Q9H0F5 515 aa16.53■□□□□ 0.24
TPM1-211ENST00000558314 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms