RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 PFKLP17858 780 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 BDNFP23560 247 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 GBP1P32455 592 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 PDE6CP51160 858 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 USP46P62068 366 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 CEBPZQ03701 1054 aaKnown RBP11.42□□□□□ -0.58
SHF-203ENST00000558294 MYO1EQ12965 1108 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 RESTQ13127 1097 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 USP39Q53GS9 565 aaKnown RBP11.42□□□□□ -0.58
SHF-203ENST00000558294 C2orf27AQ580R0 203 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 LMBRD2Q68DH5 695 aaPredicted RBP11.42□□□□□ -0.58
SHF-203ENST00000558294 VSTM1Q6UX27 236 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 C4orf50Q6ZRC1 276 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 C11orf74Q86VG3 221 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 GPD1LQ8N335 351 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 OR5B17Q8NGF7 314 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 NOC3LQ8WTT2 800 aaKnown RBP11.42□□□□□ -0.58
SHF-203ENST00000558294 MYLPFQ96A32 169 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 HPDLQ96IR7 371 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 ANKRD36BP1Q96IX9 119 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 CNOT6LQ96LI5 555 aaKnown RBP11.42□□□□□ -0.58
SHF-203ENST00000558294 CEP295NLQ96MC4 621 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 INTS13Q9NVM9 706 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 MAGEC2Q9UBF1 373 aaPredicted RBP11.42□□□□□ -0.58
SHF-203ENST00000558294 CDH9Q9ULB4 789 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 NUP205Q92621 2012 aa11.42□□□□□ -0.58
SHF-203ENST00000558294 LEFTY2O00292 366 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 PRPF6O94906 941 aaKnown RBP11.41□□□□□ -0.58
SHF-203ENST00000558294 OLFM2O95897 454 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 CYP17A1P05093 508 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
SHF-203ENST00000558294 IDEP14735 1019 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 BCKDHBP21953 392 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 GRIK1P39086 918 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 TXLNAP40222 546 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 NOVA1P51513 510 aaKnown RBP11.41□□□□□ -0.58
SHF-203ENST00000558294 SEC13P55735 322 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 SLC7A9P82251 487 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
SHF-203ENST00000558294 ANO7Q6IWH7 933 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
SHF-203ENST00000558294 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 DENND5BQ6ZUT9 1274 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 KIAA1958Q8N8K9 716 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 MDGA1Q8NFP4 955 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 PCED1BQ96HM7 432 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 TTLL2Q9BWV7 592 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 RNF38Q9H0F5 515 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
SHF-203ENST00000558294 PANK4Q9NVE7 773 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 TRPM5Q9NZQ8 1165 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 MMP17Q9ULZ9 603 aa11.41□□□□□ -0.58
SHF-203ENST00000558294 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 A0A087X0B3 334 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 ZNF840PA6NDX5 716 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 PATE3B3GLJ2 98 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 KHNYNO15037 678 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 TNNC2P02585 160 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 PROS1P07225 676 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 PDGFRBP09619 1106 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 HNRNPLP14866 589 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHF-203ENST00000558294 WARSP23381 471 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 NOP14P78316 857 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 BECN1Q14457 450 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 SURF1Q15526 300 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 MAPRE1Q15691 268 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 CRY1Q16526 586 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 SH3PXD2AQ5TCZ1 1133 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 DAB2IPQ5VWQ8 1189 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 FILIP1Q7Z7B0 1213 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 CBWD2Q8IUF1 395 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 SFTPA1Q8IWL2 248 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 ADGRG2Q8IZP9 1017 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 CCDC33Q8N5R6 958 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 MYCBPAPQ8TBZ2 947 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 PANK2Q9BZ23 570 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 TFIP11Q9UBB9 837 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 WASF3Q9UPY6 502 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 R3HCC1Q9Y3T6 440 aaKnown RBP11.4□□□□□ -0.58
SHF-203ENST00000558294 NME7Q9Y5B8 376 aa11.4□□□□□ -0.58
SHF-203ENST00000558294 TNRC6BQ9UPQ9 1833 aaKnown RBP11.39□□□□□ -0.59
SHF-203ENST00000558294 THADAQ6YHU6 1953 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 CDX4O14627 284 aaPredicted RBP11.39□□□□□ -0.59
SHF-203ENST00000558294 TRIM66O15016 1216 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 OAS1P00973 400 aaKnown RBP11.39□□□□□ -0.59
SHF-203ENST00000558294 C1QTNF9P0C862 333 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 ZSCAN22P10073 491 aaPredicted RBP11.39□□□□□ -0.59
SHF-203ENST00000558294 ANXA13P27216 316 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 HOXD13P35453 343 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 STAT6P42226 847 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 PPP3CCP48454 512 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 CACNA2D1P54289 1103 aa11.39□□□□□ -0.59
SHF-203ENST00000558294 MRPS21P82921 87 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms