RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 CSNK1G1Q9HCP0 422 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
TPM1-209ENST00000558072 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 CDY1Q9Y6F8 540 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
TPM1-209ENST00000558072 ADAM12O43184 909 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 CCDC130P13994 396 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 ATF2P15336 505 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 OR1D2P34982 312 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 GRIK1P39086 918 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 GABRB2P47870 512 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 PLXNA3P51805 1871 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 ERVFC1P60507 584 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 PDCLQ13371 301 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 GPM6BQ13491 265 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 CAMK1Q14012 370 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 TCEAL1Q15170 157 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 PTPN14Q15678 1187 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 DENND1BQ6P3S1 775 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 RSPO2Q6UXX9 243 aaPredicted RBP13.09□□□□□ -0.31
TPM1-209ENST00000558072 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 Q7L0L9 218 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 MCOLN2Q8IZK6 566 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 SCML4Q8N228 414 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 MRPL43Q8N983 215 aaKnown RBP13.09□□□□□ -0.31
TPM1-209ENST00000558072 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
TPM1-209ENST00000558072 C8orf48Q96LL4 319 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 PCDHB18PQ96TA0 734 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 NCAPGQ9BPX3 1015 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 TCF25Q9BQ70 676 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 ACP6Q9NPH0 428 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 KRT82Q9NSB4 513 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 CHD9Q3L8U1 2897 aa13.09□□□□□ -0.31
TPM1-209ENST00000558072 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 LILRB3O75022 631 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ATP2C2O75185 946 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ABLIM3O94929 683 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 GLI1P08151 1106 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 BDNFP23560 247 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 RPL34P49207 117 aaKnown RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 GALCP54803 685 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ARPP19P56211 112 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ROR1Q01973 937 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 PDE4CQ08493 712 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 MTF1Q14872 753 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 PASD1Q8IV76 773 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ARHGAP18Q8N392 663 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 UBA3Q8TBC4 463 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 RFFLQ8WZ73 363 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ZNF653Q96CK0 615 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 CDCA3Q99618 268 aaPredicted RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 SLC4A5Q9BY07 1137 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ST7Q9NRC1 585 aa13.08□□□□□ -0.32
TPM1-209ENST00000558072 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
TPM1-209ENST00000558072 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 KIF5CO60282 957 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
TPM1-209ENST00000558072 KLRC2P26717 231 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ARHGAP25P42331 645 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ALDH1A3P47895 512 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 HADHBP55084 474 aaKnown RBP13.07□□□□□ -0.32
TPM1-209ENST00000558072 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
TPM1-209ENST00000558072 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 MGAT5BQ3V5L5 792 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 CLEC20AQ6ZU45 233 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 PAQR9Q6ZVX9 377 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 MON1BQ7L1V2 547 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ARCQ7LC44 396 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ITIH5Q86UX2 942 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms