RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CAGE1Q8TC20 777 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 SH3TC2Q8TF17 1288 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 ALG3Q92685 438 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CD101Q93033 1021 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 LPPQ93052 612 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 TMEM176AQ96HP8 235 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 PBKQ96KB5 322 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CALR3Q96L12 384 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 PPP1R10Q96QC0 940 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 TSPAN18Q96SJ8 248 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 C11orf70Q9BRQ4 267 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 PARD6BQ9BYG5 372 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 TRPV6Q9H1D0 765 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 LHX5Q9H2C1 402 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 PDCL3Q9H2J4 239 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 GOLGA2P5Q9HBQ8 144 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CHST12Q9NRB3 414 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 FAM105AQ9NUU6 356 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 MIOSQ9NXC5 875 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 ADAM22Q9P0K1 906 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 CYTH4Q9UIA0 394 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 PADI3Q9ULW8 664 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 BARX2Q9UMQ3 279 aaPredicted RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 UBQLN1Q9UMX0 589 aaKnown RBP7.82□□□□□ -1.16
SPG11-204ENST00000557866 TRIM17Q9Y577 477 aa7.82□□□□□ -1.16
SPG11-204ENST00000557866 O00370 1275 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 PIK3R2O00459 728 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 GPR182O15218 404 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 TLR3O15455 904 aaKnown RBP7.81□□□□□ -1.16
SPG11-204ENST00000557866 HCRTO43612 131 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 CEP104O60308 925 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 LSM8O95777 96 aaKnown RBP7.81□□□□□ -1.16
SPG11-204ENST00000557866 CD4P01730 458 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 FGFR1P11362 822 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 EPXP11678 715 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 CKBP12277 381 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 CD19P15391 556 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 ATF7P17544 494 aaPredicted RBP7.81□□□□□ -1.16
SPG11-204ENST00000557866 CD33P20138 364 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 CTNNA2P26232 953 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 ADH6P28332 368 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 LRPAP1P30533 357 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 MARCKSL1P49006 195 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 PEX5P50542 639 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 PRMT2P55345 433 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 PSMA6P60900 246 aaKnown RBP7.81□□□□□ -1.16
SPG11-204ENST00000557866 TNNC1P63316 161 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 MRPS25P82663 173 aaKnown RBP7.81□□□□□ -1.16
SPG11-204ENST00000557866 ITIH3Q06033 890 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 MYO1EQ12965 1108 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 MBTPS1Q14703 1052 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 SOWAHAQ2M3V2 549 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 CFAP221Q4G0U5 840 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 PTPN20Q4JDL3 420 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 AGMOQ6ZNB7 445 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 SIX5Q8N196 739 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RASGEF1CQ8N431 466 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 TMEM35BQ8NCS4 154 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 GLMNQ92990 594 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 VCPIP1Q96JH7 1222 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RPGRIP1Q96KN7 1286 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RPS6KC1Q96S38 1066 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 GAD1Q99259 594 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 ZNF518BQ9C0D4 1074 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.81□□□□□ -1.16
SPG11-204ENST00000557866 RBM12Q9NTZ6 932 aaKnown RBP7.81□□□□□ -1.16
SPG11-204ENST00000557866 MARK1Q9P0L2 795 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 CACNG4Q9UBN1 327 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RNF14Q9UBS8 474 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 TJP2Q9UDY2 1190 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 ANAPC7Q9UJX3 599 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 RAB21Q9UL25 225 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.81□□□□□ -1.16
SPG11-204ENST00000557866 SNX9Q9Y5X1 595 aa7.81□□□□□ -1.16
SPG11-204ENST00000557866 TRIP12Q14669 1992 aaPredicted RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 CASP8AP2Q9UKL3 1982 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 ARVCFO00192 962 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 MED7O43513 233 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 ZNF623O75123 536 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 PFKMP08237 780 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 VDRP11473 427 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 ITGA4P13612 1032 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 MLH1P40692 756 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 PAFAH1B1P43034 410 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 CDK7P50613 346 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 VSNL1P62760 191 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 TUBB4BP68371 445 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 OGDHQ02218 1023 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 PAK2Q13177 524 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 ZNF211Q13398 564 aaPredicted RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 ARHGEF6Q15052 776 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 CNGA2Q16280 664 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 TBCELQ5QJ74 424 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 CYP4A22Q5TCH4 519 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms