RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	AAMP	Q13685	434 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	KCNB1	Q14721	858 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	DHCR24	Q15392	516 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	ADCK5	Q3MIX3	580 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	FAM177A1	Q8N128	213 aa	Predicted RBP	10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	THEM5	Q8N1Q8	247 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	TMEM130	Q8N3G9	435 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	FSIP1	Q8NA03	581 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	LRRC15	Q8TF66	581 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	SPIRE2	Q8WWL2	714 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	BRF1	Q92994	677 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	LGMN	Q99538	433 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	TARS2	Q9BW92	718 aa	Known RBP	10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	ANO2	Q9NQ90	1003 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	GMIP	Q9P107	970 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	ARHGAP26	Q9UNA1	814 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	PCDHGA1	Q9Y5H4	931 aa		10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.15	□□□□□ -0.78
PABPN1-208	ENST00000557702	COL5A1	P20908	1838 aa	Predicted RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	ARHGEF35	A5YM69	484 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	SLC9A3R1	O14745	358 aa	Predicted RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	XPOT	O43592	962 aa	Known RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PRPF40A	O75400	957 aa	Known RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	NFIC	P08651	508 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	GP1BB	P13224	206 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	NDUFV2	P19404	249 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PROZ	P22891	400 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PAX3	P23760	479 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	CD6	P30203	668 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	GPR15	P49685	360 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PDE6C	P51160	858 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	LILRA4	P59901	499 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	BNC1	Q01954	994 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	KDSR	Q06136	332 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	SPAG1	Q07617	926 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	KRT32	Q14532	448 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	SF3A1	Q15459	793 aa	Known RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	TSGA10IP	Q3SY00	556 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	MPZL3	Q6UWV2	235 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702		Q6ZUG5	572 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PIK3AP1	Q6ZUJ8	805 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	NUDT18	Q6ZVK8	323 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	FILIP1	Q7Z7B0	1213 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	LRRTM3	Q86VH5	581 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	C12orf40	Q86WS4	652 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	METTL23	Q86XA0	190 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	KIAA1958	Q8N8K9	716 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	OXER1	Q8TDS5	423 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	TTC9	Q92623	222 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	KIFAP3	Q92845	792 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	TRMT2B	Q96GJ1	504 aa	Known RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	TRIM4	Q9C037	500 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	FAM117A	Q9C073	453 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PLEKHA5	Q9HAU0	1116 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	GCNT4	Q9P109	453 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	FTSJ1	Q9UET6	329 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	DSE	Q9UL01	958 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	UBQLN1	Q9UMX0	589 aa	Known RBP	10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PCDHB5	Q9Y5E4	795 aa		10.14	□□□□□ -0.79
PABPN1-208	ENST00000557702	PHLPP2	Q6ZVD8	1323 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	NBPF19	A0A087WUL8	3843 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702		A0A1W2PQF6	199 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CCDC169	A6NNP5	214 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ENO4	A6NNW6	628 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	BTBD18	B2RXH4	712 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	LEFTY2	O00292	366 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	BRINP1	O60477	761 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	DEXI	O95424	95 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ADH1C	P00326	375 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CYP11A1	P05108	521 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	SPATA31C1	P0DKV0	1188 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	NCAM1	P13591	858 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	NTSR1	P30989	418 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	TNFSF9	P41273	254 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	WAS	P42768	502 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CLDN6	P56747	220 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CCT2	P78371	535 aa	Known RBP	10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ATP2C1	P98194	919 aa	Predicted RBP	10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ZBTB6	Q15916	424 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CALCRL	Q16602	461 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	INAVA	Q3KP66	663 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	TBC1D25	Q3MII6	688 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	SEZ6	Q53EL9	994 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	SDHAF4	Q5VUM1	108 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	SDE2	Q6IQ49	451 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ERICH1	Q86X53	443 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CATSPER3	Q86XQ3	398 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	DCP1B	Q8IZD4	617 aa	Known RBP	10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ZNF248	Q8NDW4	579 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	STKLD1	Q8NE28	680 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CADM4	Q8NFZ8	388 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	IPO4	Q8TEX9	1081 aa	Known RBP	10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	MYRFL	Q96LU7	910 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	ESYT1	Q9BSJ8	1104 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	TMEM134	Q9H6X4	195 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	CPNE5	Q9HCH3	593 aa		10.13	□□□□□ -0.79
PABPN1-208	ENST00000557702	POLD4	Q9HCU8	107 aa		10.13	□□□□□ -0.79

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