RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 CCR1P32246 355 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 HALP42357 657 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 SERPINB10P48595 397 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.42□□□□□ -0.42
NEK9-210ENST00000557026 IFT88Q13099 833 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 LENG9Q96B70 501 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 MRPL1Q9BYD6 325 aaKnown RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 RPRD1BQ9NQG5 326 aaKnown RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 CES1P23141 567 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 VCPP55072 806 aaKnown RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 RHOAP61586 193 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 ERVK-24P63145 666 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 ACVR2BQ13705 512 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 ZRANB3Q5FWF4 1079 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 TTC30BQ8N4P2 665 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 MCEEQ96PE7 176 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 CLPBQ9H078 707 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 RNF208Q9H0X6 261 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 CARD9Q9H257 536 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 POLLQ9UGP5 575 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 CPA4Q9UI42 421 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 TRHDEQ9UKU6 1024 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 MORC2Q9Y6X9 1032 aaPredicted RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 TBKBP1A7MCY6 615 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 HMBSP08397 361 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 SLCO1A2P46721 670 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 LIG3P49916 1009 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 SLFN11Q7Z7L1 901 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 UNC93AQ86WB7 457 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 POP5Q969H6 163 aaKnown RBP12.42□□□□□ -0.42
NEK9-210ENST00000557026 STARD13Q9Y3M8 1113 aa12.42□□□□□ -0.42
NEK9-210ENST00000557026 RNF103-CHMP3A0A140T963 221 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 A0A1B0GW55 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4L2P0CJ85 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4L3P0CJ86 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4L4P0CJ87 422 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4L5P0CJ88 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4L6P0CJ89 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4L7P0CJ90 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 FGFR2P21802 821 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 CXCR5P32302 372 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 FAM47EQ6ZV65 393 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 LRRC71Q8N4P6 559 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 MRPL46Q9H2W6 279 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DMAP1Q9NPF5 467 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 DUX4Q9UBX2 424 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ACKR2O00590 384 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DIAPH2O60879 1101 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 RGS7P49802 495 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 GALCP54803 685 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 CACNB2Q08289 660 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ZNF555Q8NEP9 628 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 CEP70Q8NHQ1 597 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DDI1Q8WTU0 396 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ZKSCAN4Q969J2 545 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 QRFPRQ96P65 431 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK9-210ENST00000557026 SNAP23O00161 211 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ADCY3O60266 1144 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ALDH5A1P51649 535 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 NAB1Q13506 487 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 TCEA2Q15560 299 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK9-210ENST00000557026 ZC3H18Q86VM9 953 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 SYT15Q9BQS2 421 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 RAD21L1Q9H4I0 556 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 MRPL17Q9NRX2 175 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 COL1A2P08123 1366 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 CLUHO75153 1309 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 A0A0G2JND7 137 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 M0QYT0 321 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 VIL1P09327 827 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 TGM2P21980 687 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 POU4F1Q01851 419 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 CATSPER3Q86XQ3 398 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ARMC2Q8NEN0 867 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 STAMBPL1Q96FJ0 436 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 VIPAS39Q9H9C1 493 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 NEK6Q9HC98 313 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 C20orf96Q9NUD7 363 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 WWOXQ9NZC7 414 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 ZSCAN5CA6NGD5 496 aaPredicted RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 RBAK-RBAKDNI3L0D1 243 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 KPNA5O15131 536 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms