RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 PLIN4Q96Q06 1357 aa5.36□□□□□ -1.55
ATXN3-243ENST00000556671 ALPK3Q96L96 1907 aa5.36□□□□□ -1.55
ATXN3-243ENST00000556671 RPTORQ8N122 1335 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 KLF18A0A0U1RQI7 1052 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 A0A1W2PRX2 142 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 UBA6A0AVT1 1052 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 ZBTB43O43298 467 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 PLA2G6O60733 806 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 SGPL1O95470 568 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CFBP00751 764 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CYP17A1P05093 508 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 ICAM1P05362 532 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 HMGB1P09429 215 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CALM1P0DP23 149 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CALM2P0DP24 149 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CALM3P0DP25 149 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 HSPA4P34932 840 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 STK3Q13188 491 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 SQSTM1Q13501 440 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TUBA3CQ13748 450 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 BAATQ14032 418 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 ZNF460Q14592 562 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 BMS1Q14692 1282 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 GRM4Q14833 912 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 ACAP1Q15027 740 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 QRICH1Q2TAL8 776 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TKFCQ3LXA3 575 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CRB2Q5IJ48 1285 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 FNDC7Q5VTL7 733 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 SLFN12LQ6IEE8 588 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TUBA3EQ6PEY2 450 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TMPRSS6Q8IU80 811 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 FAM177A1Q8N128 213 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TBC1D5Q92609 795 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 RRP36Q96EU6 259 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 ZNF333Q96JL9 665 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 PIGSQ96S52 555 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.551e-11■■■■□ 25.2
ATXN3-243ENST00000556671 JMJD4Q9H9V9 463 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 LY9Q9HBG7 655 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 PDRG1Q9NUG6 133 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 MAD2L2Q9UI95 211 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 ZHX1Q9UKY1 873 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 CNPY2Q9Y2B0 182 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 MRPL11Q9Y3B7 192 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 SH3BP1Q9Y3L3 701 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 PCDHA1Q9Y5I3 950 aa5.35□□□□□ -1.55
ATXN3-243ENST00000556671 TNPO3Q9Y5L0 923 aaKnown RBP5.35□□□□□ -1.55
ATXN3-243ENST00000556671 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GOLGA8BA8MQT2 603 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 B4DLN1 442 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 OVOL3O00110 214 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 SH2B2O14492 632 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 OPA1O60313 960 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GJB1P08034 283 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 RPS6KB1P23443 525 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 NT5C2P49902 561 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GNAQP50148 359 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 MRPL12P52815 198 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 OAZ1P54368 228 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 EXOSC10Q01780 885 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GRB14Q14449 540 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 EPHA7Q15375 998 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GJC2Q5T442 439 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 BTNL9Q6UXG8 535 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 RUFY3Q7L099 469 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 ABRAQ8N0Z2 381 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 KIAA1958Q8N8K9 716 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 REPS2Q8NFH8 660 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 U2AF1L4Q8WU68 220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 USP6NLQ92738 828 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GCDHQ92947 438 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 CUL5Q93034 780 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 GPHA2Q96T91 129 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 MPHOSPH6Q99547 160 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 TRIM8Q9BZR9 551 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 HAPLN2Q9GZV7 340 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 RANBP17Q9H2T7 1088 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 PCIF1Q9H4Z3 704 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 A1CFQ9NQ94 594 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 KCMF1Q9P0J7 381 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
ATXN3-243ENST00000556671 ADD3Q9UEY8 706 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.55
ATXN3-243ENST00000556671 PDE4DIPQ5VU43 2346 aa5.34□□□□□ -1.56
ATXN3-243ENST00000556671 PFASO15067 1338 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ABCB11O95342 1321 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ZNF236Q9UL36 1845 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 373.3 ms