RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 HOXA6P31267 233 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 GJA4P35212 333 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 CASP4P49662 377 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 STK4Q13043 487 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 PKN3Q6P5Z2 889 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 SYAP1Q96A49 352 aaPredicted RBP24.1■■□□□ 1.45
ACTN1-220ENST00000556433 EXOC4Q96A65 974 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 C8orf48Q96LL4 319 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 P2RY13Q9BPV8 354 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 XYLT2Q9H1B5 865 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 DPEP3Q9H4B8 488 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 PARD6AQ9NPB6 346 aa24.1■■□□□ 1.45
ACTN1-220ENST00000556433 F8VP50 259 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 ACTN4O43707 911 aaKnown RBP24.09■■□□□ 1.45
ACTN1-220ENST00000556433 ATG13O75143 517 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 EGFP01133 1207 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 RETP07949 1114 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 PDE6CP51160 858 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 SPEM2Q0P670 501 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 USP4Q13107 963 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 BIRC3Q13489 604 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 PLEKHO2Q8TD55 490 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 LINC00597Q9H2U6 94 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 EXOC1Q9NV70 894 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 ARHGAP26Q9UNA1 814 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 OBSL1O75147 1896 aa24.09■■□□□ 1.45
ACTN1-220ENST00000556433 A0A1B0GVL5 298 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 PRR5-ARHGAP8B1AHC4 643 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 DRD1P21728 446 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 ARHGAP8P85298 464 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 LMNB2Q03252 620 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 PSMD2Q13200 908 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 KMT5BQ4FZB7 885 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 CEP68Q76N32 757 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 WDR5BQ86VZ2 330 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 KIAA0895Q8NCT3 520 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 PARD3BQ8TEW8 1205 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 ATP2A3Q93084 1043 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 TTLL2Q9BWV7 592 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 SLC8A2Q9UPR5 921 aa24.08■■□□□ 1.45
ACTN1-220ENST00000556433 DCHS1Q96JQ0 3298 aa24.08■■□□□ 1.44
ACTN1-220ENST00000556433 RNF40O75150 1001 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 CLSTN1O94985 981 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 ABL1P00519 1130 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 TCF3P15923 654 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 PFKLP17858 780 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 SDHBP21912 280 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 CMA1P23946 247 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 PPP3CCP48454 512 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 AP3M2P53677 418 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 NOP14P78316 857 aaKnown RBP24.07■■□□□ 1.44
ACTN1-220ENST00000556433 NR1H3Q13133 447 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 EML3Q32P44 896 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 TDRD10Q5VZ19 366 aaKnown RBP24.07■■□□□ 1.44
ACTN1-220ENST00000556433 NAIF1Q69YI7 327 aaPredicted RBP24.07■■□□□ 1.44
ACTN1-220ENST00000556433 B3GALNT2Q8NCR0 500 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 B3GNT5Q9BYG0 378 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 ZNF518BQ9C0D4 1074 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 ELOVL4Q9GZR5 314 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 DMAC2Q9NW81 257 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 FRYLO94915 3013 aa24.07■■□□□ 1.44
ACTN1-220ENST00000556433 ZNF840PA6NDX5 716 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 LRRIQ3A6PVS8 624 aaPredicted RBP24.06■■□□□ 1.44
ACTN1-220ENST00000556433 CLDN5O00501 218 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 C4BPAP04003 597 aaKnown RBP24.06■■□□□ 1.44
ACTN1-220ENST00000556433 PFKFB1P16118 471 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 PXNP49023 591 aaPredicted RBP24.06■■□□□ 1.44
ACTN1-220ENST00000556433 CACNA2D1P54289 1103 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 CDH8P55286 799 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 ZNF699Q32M78 642 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.06■■□□□ 1.44
ACTN1-220ENST00000556433 SLC9A9Q8IVB4 645 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 CD101Q93033 1021 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 SMYD3Q9H7B4 428 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 VRTNQ9H8Y1 702 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 USP25Q9UHP3 1055 aa24.06■■□□□ 1.44
ACTN1-220ENST00000556433 LEFTY2O00292 366 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 CLDN10P78369 228 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 TAF10Q12962 218 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 NCOA4Q13772 614 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 FBXO43Q4G163 708 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 ZNF667Q5HYK9 610 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 SPATA32Q96LK8 384 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 RNF38Q9H0F5 515 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 KCTD10Q9H3F6 313 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 TMEM30AQ9NV96 361 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 ATG2BQ96BY7 2078 aa24.05■■□□□ 1.44
ACTN1-220ENST00000556433 CACNA1AO00555 2505 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 MED19A0JLT2 244 aaPredicted RBP24.04■■□□□ 1.44
ACTN1-220ENST00000556433 PDXKO00764 312 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 RAP1GAPP47736 663 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 ATXN1P54253 815 aaKnown RBP24.04■■□□□ 1.44
ACTN1-220ENST00000556433 ZXDBP98169 803 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 IFRD2Q12894 506 aaPredicted RBP24.04■■□□□ 1.44
ACTN1-220ENST00000556433 ELMO3Q96BJ8 720 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 CHAMP1Q96JM3 812 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 SLITRK1Q96PX8 696 aa24.04■■□□□ 1.44
ACTN1-220ENST00000556433 POLR3BQ9NW08 1133 aaPredicted RBP24.04■■□□□ 1.44
ACTN1-220ENST00000556433 CDV3Q9UKY7 258 aaKnown RBP24.04■■□□□ 1.44
ACTN1-220ENST00000556433 ANAPC1Q9H1A4 1944 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms