RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 KELP23276 732 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 EPHB2P29323 1055 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 ARFIP2P53365 341 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 EPHB1P54762 984 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 CYP4F2P78329 520 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 TBC1D25Q3MII6 688 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 DEPDC1Q5TB30 811 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 ZNF66Q6ZN08 573 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 Q6ZWC4 215 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 ZNF280BQ86YH2 543 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 PPP1R35Q8TAP8 253 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 TAAR9Q96RI9 348 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 ACO2Q99798 780 aaKnown RBP6.28□□□□□ -1.4
PRPF39-209ENST00000556353 TRIM54Q9BYV2 358 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 CDH19Q9H159 772 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 NRIP3Q9NQ35 241 aa6.28□□□□□ -1.4
PRPF39-209ENST00000556353 ABCA10Q8WWZ4 1543 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 BTN3A1O00481 513 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 RFPL1O75677 317 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 CSF1RP07333 972 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 DLDP09622 509 aaKnown RBP6.27□□□□□ -1.41
PRPF39-209ENST00000556353 CYP2D6P10635 497 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 GPSM2P81274 684 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 HOXA4Q00056 320 aaPredicted RBP6.27□□□□□ -1.41
PRPF39-209ENST00000556353 B3GNT9Q6UX72 402 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 NEK8Q86SG6 692 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 GAS2L3Q86XJ1 694 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
PRPF39-209ENST00000556353 ABHD11Q8NFV4 315 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 OR6B3Q8NGW1 331 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 SOCS4Q8WXH5 440 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 NT5C1BQ96P26 610 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 MACROD1Q9BQ69 325 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 TRMT13Q9NUP7 481 aaKnown RBP6.27□□□□□ -1.41
PRPF39-209ENST00000556353 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.27□□□□□ -1.41
PRPF39-209ENST00000556353 SYNJ2O15056 1496 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 GRIN2BQ13224 1484 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 CEP170Q5SW79 1584 aa6.27□□□□□ -1.41
PRPF39-209ENST00000556353 SHROOM2Q13796 1616 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 PRRT4C9JH25 899 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 TJP3O95049 919 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ADORA2AP29274 412 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 MPGP29372 298 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 DGKEP52429 567 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 SSBP2P81877 361 aaPredicted RBP6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZIK1Q3SY52 487 aaPredicted RBP6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZNF626Q68DY1 528 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZNF425Q6IV72 752 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 MTHFD1LQ6UB35 978 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 TRIM72Q6ZMU5 477 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZBTB34Q8NCN2 500 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 CYP2W1Q8TAV3 490 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 DAZAP1Q96EP5 407 aaKnown RBP6.26□□□□□ -1.41
PRPF39-209ENST00000556353 DPCDQ9BVM2 203 aaPredicted RBP6.26□□□□□ -1.41
PRPF39-209ENST00000556353 MS4A7Q9GZW8 240 aaPredicted RBP6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZMAT3Q9HA38 289 aaKnown RBP6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZSCAN32Q9NX65 697 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 ZIM2Q9NZV7 527 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 GAPVD1Q14C86 1478 aa6.26□□□□□ -1.41
PRPF39-209ENST00000556353 PPP6CO00743 305 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 PHGDHO43175 533 aaKnown RBP6.25□□□□□ -1.41
PRPF39-209ENST00000556353 MARCH6O60337 910 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 TBC1D4O60343 1298 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 PRKCBP05771 671 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 KITP10721 976 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 KCNA3P22001 575 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 AGFG1P52594 562 aaKnown RBP6.25□□□□□ -1.41
PRPF39-209ENST00000556353 PRKAG1P54619 331 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 CTBP1Q13363 440 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 RAB32Q13637 225 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 EPM2AIP1Q7L775 607 aaPredicted RBP6.25□□□□□ -1.41
PRPF39-209ENST00000556353 YTHDF3Q7Z739 585 aaKnown RBP6.25□□□□□ -1.41
PRPF39-209ENST00000556353 ABRAQ8N0Z2 381 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 MPP5Q8N3R9 675 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 PNLDC1Q8NA58 520 aaKnown RBP6.25□□□□□ -1.41
PRPF39-209ENST00000556353 DPH1Q9BZG8 443 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 GABRQQ9UN88 632 aa6.25□□□□□ -1.41
PRPF39-209ENST00000556353 MYO1FO00160 1098 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 TUBB4AP04350 444 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 CTGFP29279 349 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 SLC13A2Q13183 592 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 CEP78Q5JTW2 689 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 MORN5Q5VZ52 161 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 CAND1Q86VP6 1230 aaKnown RBP6.24□□□□□ -1.41
PRPF39-209ENST00000556353 IZUMO1Q8IYV9 350 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 BPIFB1Q8TDL5 484 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 NAF1Q96HR8 494 aaKnown RBP6.24□□□□□ -1.41
PRPF39-209ENST00000556353 ANLNQ9NQW6 1124 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 KIF13AQ9H1H9 1805 aa6.24□□□□□ -1.41
PRPF39-209ENST00000556353 H7C1Q1 480 aa6.23□□□□□ -1.41
PRPF39-209ENST00000556353 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
PRPF39-209ENST00000556353 TUSC2O75896 110 aa6.23□□□□□ -1.41
PRPF39-209ENST00000556353 L1TD1Q5T7N2 865 aaKnown RBP6.23□□□□□ -1.41
PRPF39-209ENST00000556353 SLC18B1Q6NT16 456 aa6.23□□□□□ -1.41
PRPF39-209ENST00000556353 KIRREL2Q6UWL6 708 aa6.23□□□□□ -1.41
PRPF39-209ENST00000556353 NPNTQ6UXI9 565 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms