RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 LEMD2Q8NC56 503 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 SUSD6Q92537 303 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 ZSWIM1Q9BR11 485 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 WDR6Q9NNW5 1121 aaKnown RBP14.97□□□□□ -0.01
SNX6-206ENST00000556162 ASAH2Q9NR71 780 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 EHD2Q9NZN4 543 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 MYO6Q9UM54 1294 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 MAGED2Q9UNF1 606 aaPredicted RBP14.97□□□□□ -0.01
SNX6-206ENST00000556162 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNX6-206ENST00000556162 ITIH6Q6UXX5 1313 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 SLC38A8A6NNN8 435 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 MICAL2O94851 1124 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 RHOP08100 348 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 CCDC172P0C7W6 258 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 CYP11B1P15538 503 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 KRT9P35527 623 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 MRPS5P82675 430 aaKnown RBP14.97□□□□□ -0.01
SNX6-206ENST00000556162 PDZD4Q76G19 769 aaPredicted RBP14.97□□□□□ -0.01
SNX6-206ENST00000556162 TTC30AQ86WT1 665 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 NUP93Q8N1F7 819 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 ZMIZ2Q8NF64 920 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 ZNF397Q8NF99 534 aaPredicted RBP14.97□□□□□ -0.01
SNX6-206ENST00000556162 UBA3Q8TBC4 463 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 CPLX3Q8WVH0 158 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 ATXN2LQ8WWM7 1075 aaKnown RBP14.97□□□□□ -0.01
SNX6-206ENST00000556162 UBXN6Q9BZV1 441 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 TTYH3Q9C0H2 523 aa14.97□□□□□ -0.01
SNX6-206ENST00000556162 A0A1W2PQJ5 194 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 M0QYV0 167 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
SNX6-206ENST00000556162 PDE6CP51160 858 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 NTHL1P78549 312 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 PDE4CQ08493 712 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 BST2Q10589 180 aaKnown RBP14.96□□□□□ -0.01
SNX6-206ENST00000556162 MTMR3Q13615 1198 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 VSTM4Q8IW00 320 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 HS6ST3Q8IZP7 471 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 STKLD1Q8NE28 680 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 BAP1Q92560 729 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 PDCL3Q9H2J4 239 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 PNPLA8Q9NP80 782 aa14.96□□□□□ -0.01
SNX6-206ENST00000556162 UXTQ9UBK9 157 aaPredicted RBP14.96□□□□□ -0.01
SNX6-206ENST00000556162 C5orf42Q9H799 3197 aa14.96□□□□□ -0.02
SNX6-206ENST00000556162 ZNF197O14709 1029 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 RTN3O95197 1032 aaPredicted RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 FGF19O95750 216 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 MYL4P12829 197 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 FERP16591 822 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 ARID5AQ03989 594 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 SMAD2Q15796 467 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 MEA1Q16626 185 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 NUCKS1Q9H1E3 243 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 AVENQ9NQS1 362 aaPredicted RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 CAPN11Q9UMQ6 739 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 MRPS23Q9Y3D9 190 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 LRRC53A6NM62 1247 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 TNFRSF10BO14763 440 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 XPO1O14980 1071 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 FSHRP23945 695 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 ZNF75DP51815 510 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 SLC5A3P53794 718 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 EPHA5P54756 1037 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 TRIM14Q14142 442 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 PKDCCQ504Y2 493 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 PIGZQ86VD9 579 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 SECISBP2LQ93073 1101 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 TRMT2BQ96GJ1 504 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 MYRFLQ96LU7 910 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 LRRC3Q9BY71 257 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 POMKQ9H5K3 350 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 COMMD8Q9NX08 183 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 PCDHGC3Q9UN70 934 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 LUC7L2Q9Y383 392 aaKnown RBP14.95□□□□□ -0.02
SNX6-206ENST00000556162 CLUHO75153 1309 aa14.95□□□□□ -0.02
SNX6-206ENST00000556162 UNC80Q8N2C7 3258 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 HHLA1C9JL84 531 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 TPM1P09493 284 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 YWHAQP27348 245 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 GABRR2P28476 465 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 KCNQ1P51787 676 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 ZBED6P86452 979 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 IFRD2Q12894 506 aaPredicted RBP14.94□□□□□ -0.02
SNX6-206ENST00000556162 SFMBT2Q5VUG0 894 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 TAF3Q5VWG9 929 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 DENND1BQ6P3S1 775 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 NOP9Q86U38 636 aaKnown RBP14.94□□□□□ -0.02
SNX6-206ENST00000556162 ZNF677Q86XU0 584 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 TMC8Q8IU68 726 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 GPIHBP1Q8IV16 184 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 EPS8L1Q8TE68 723 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 SLC35F5Q8WV83 523 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 MRFAP1L1Q96HT8 127 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 GCNAQ96QF7 691 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 FBXO44Q9H4M3 255 aa14.94□□□□□ -0.02
SNX6-206ENST00000556162 ZNF334Q9HCZ1 680 aaPredicted RBP14.94□□□□□ -0.02
SNX6-206ENST00000556162 CEP83Q9Y592 693 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms