RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 ACOT1Q86TX2 421 aa17.23■□□□□ 0.35
CHGA-204ENST00000556076 SUMF1Q8NBK3 374 aa17.23■□□□□ 0.35
CHGA-204ENST00000556076 SPATA17Q96L03 361 aa17.23■□□□□ 0.35
CHGA-204ENST00000556076 KCNK16Q96T55 309 aa17.23■□□□□ 0.35
CHGA-204ENST00000556076 C8orf33Q9H7E9 229 aaPredicted RBP17.23■□□□□ 0.35
CHGA-204ENST00000556076 FBRSL1Q9HCM7 1045 aaKnown RBP17.23■□□□□ 0.35
CHGA-204ENST00000556076 THG1LQ9NWX6 298 aaKnown RBP17.23■□□□□ 0.35
CHGA-204ENST00000556076 UXTQ9UBK9 157 aaPredicted RBP17.23■□□□□ 0.35
CHGA-204ENST00000556076 TRAV19A0A0A6YYK7 116 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 CALUO43852 315 aaPredicted RBP17.22■□□□□ 0.35
CHGA-204ENST00000556076 ABL1P00519 1130 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 MYL1P05976 194 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 CCDC130P13994 396 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 DDX6P26196 483 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHGA-204ENST00000556076 ANXA13P27216 316 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 MAGEA9P43362 315 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 GCLMP48507 274 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 PPP3CAQ08209 521 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 RUNX3Q13761 415 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
CHGA-204ENST00000556076 ZNF77Q15935 545 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 ZACNQ401N2 412 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 DENND5BQ6ZUT9 1274 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 RALGPS2Q86X27 583 aaPredicted RBP17.22■□□□□ 0.35
CHGA-204ENST00000556076 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
CHGA-204ENST00000556076 TMC2Q8TDI7 906 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 MED10Q9BTT4 135 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 LINC00597Q9H2U6 94 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 TRAF3IP3Q9Y228 551 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 MYH10P35580 1976 aa17.22■□□□□ 0.35
CHGA-204ENST00000556076 USP17L7P0C7H9 530 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 PIK3CAP42336 1068 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 VAMP7P51809 220 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 TAF10Q12962 218 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 MTF1Q14872 753 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 ZNF528Q3MIS6 628 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 ZCWPW2Q504Y3 356 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 ZC3H14Q6PJT7 736 aaKnown RBP17.21■□□□□ 0.35
CHGA-204ENST00000556076 FAM35AQ86V20 835 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 GUF1Q8N442 669 aaKnown RBP17.21■□□□□ 0.35
CHGA-204ENST00000556076 SCAMP5Q8TAC9 235 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 SH3RF2Q8TEC5 729 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 TWNKQ96RR1 684 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 TTLL2Q9BWV7 592 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 RNF38Q9H0F5 515 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 VRTNQ9H8Y1 702 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
CHGA-204ENST00000556076 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
CHGA-204ENST00000556076 ANTXRLA6NF34 631 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 TRIM66O15016 1216 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 KINO60870 393 aaKnown RBP17.2■□□□□ 0.34
CHGA-204ENST00000556076 BEST1O76090 585 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 HDCP19113 662 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 ASPAP45381 313 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 PGFP49763 221 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 NDST1P52848 882 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 USP4Q13107 963 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 SRSF5Q13243 272 aaKnown RBP17.2■□□□□ 0.34
CHGA-204ENST00000556076 CCINQ13939 588 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 KCNB1Q14721 858 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 LPAL2Q16609 132 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 HEATR6Q6AI08 1181 aaKnown RBP17.2■□□□□ 0.34
CHGA-204ENST00000556076 FSTL4Q6MZW2 842 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 FUKQ8N0W3 1084 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 C12orf29Q8N999 325 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 ZBTB44Q8NCP5 570 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 TMEM174Q8WUU8 243 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 ATRIPQ8WXE1 791 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 NELL1Q92832 810 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
CHGA-204ENST00000556076 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 FAM49BQ9NUQ9 324 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 ZSCAN32Q9NX65 697 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 TRPM5Q9NZQ8 1165 aa17.2■□□□□ 0.34
CHGA-204ENST00000556076 MYO16Q9Y6X6 1858 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 ZNF840PA6NDX5 716 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 CHURC1-FNTBB4DL54 471 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 ASS1P00966 412 aaKnown RBP17.19■□□□□ 0.34
CHGA-204ENST00000556076 EGFP01133 1207 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 CXCL12P48061 93 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 FNTBP49356 437 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 AP3M2P53677 418 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 MLLT6P55198 1093 aaPredicted RBP17.19■□□□□ 0.34
CHGA-204ENST00000556076 NOP14P78316 857 aaKnown RBP17.19■□□□□ 0.34
CHGA-204ENST00000556076 ADAM9Q13443 819 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
CHGA-204ENST00000556076 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 ISM2Q6H9L7 571 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 CC2D1AQ6P1N0 951 aaPredicted RBP17.19■□□□□ 0.34
CHGA-204ENST00000556076 KIAA2013Q8IYS2 634 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 HINFPQ9BQA5 517 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 ELOVL4Q9GZR5 314 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 KIF9Q9HAQ2 790 aa17.19■□□□□ 0.34
CHGA-204ENST00000556076 KRT82Q9NSB4 513 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms