RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 PABPC3Q9H361 631 aaKnown RBP10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 RNF186Q9NXI6 227 aa10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 USP18Q9UMW8 372 aa10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 DRG1Q9Y295 367 aaKnown RBP10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 GIT1Q9Y2X7 761 aa10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 NME7Q9Y5B8 376 aa10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 NFS1Q9Y697 457 aa10.6□□□□□ -0.71
EFCAB11-209ENST00000556005 C3orf70A6NLC5 250 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 HMGB1P1B2RPK0 211 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 PIK3R2O00459 728 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 LIASO43766 372 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 AOC2O75106 756 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 CABYRO75952 493 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TRUB2O95900 331 aaKnown RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 THP07101 528 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 FGFR1P11362 822 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 RARGP13631 454 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ELNP15502 786 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 WARSP23381 471 aaKnown RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 KDELR1P24390 212 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 LMO2P25791 158 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 IL1R2P27930 398 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ACADSBP45954 432 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 LMAN1P49257 510 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ADCY2Q08462 1091 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 SMTNL2Q2TAL5 461 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 DEFB115Q30KQ5 88 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 OLFML1Q6UWY5 402 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 RNF180Q86T96 592 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 CMASQ8NFW8 434 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ACSF2Q96CM8 615 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 FRMD8P1Q9BZ68 369 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TMBIM4Q9HC24 238 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 PCSK1NQ9UHG2 260 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ZNF148Q9UQR1 794 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 CENPFP49454 3210 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 A6NNZ2 444 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TULP2O00295 520 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 CYB561D2O14569 222 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 IVDP26440 423 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 SDC4P31431 198 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 MLH1P40692 756 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 RAB27AP51159 221 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 SLC8A3P57103 927 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 IFFO1Q0D2I5 559 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 PTK7Q13308 1070 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TRIP13Q15645 432 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 TUBB8Q3ZCM7 444 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ZNF618Q5T7W0 954 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 DENND2CQ68D51 928 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 CAPNS2Q96L46 248 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 ATP6V1G3Q96LB4 118 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 HSFY1Q96LI6 401 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 GAD1Q99259 594 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 FAM118BQ9BPY3 351 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 SRRDQ9UH36 339 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 DNPEPQ9ULA0 475 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 NOD1Q9Y239 953 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 NEU2Q9Y3R4 380 aa10.59□□□□□ -0.71
EFCAB11-209ENST00000556005 DPYSL4O14531 572 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 PAPSS1O43252 624 aaPredicted RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 PRPSAP2O60256 369 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ZNF623O75123 536 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 GRAP2O75791 330 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 TOMM70O94826 608 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ITGAVP06756 1048 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 NUDT17P0C025 328 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 CCDC130P13994 396 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 CAPN2P17655 700 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ADORA2BP29275 332 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 SCNN1AP37088 669 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 RPL34P49207 117 aaKnown RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ITGA8P53708 1063 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 PLCB3Q01970 1234 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ZNF844Q08AG5 666 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ITGA7Q13683 1181 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 TAZQ16635 292 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 CCDC14Q49A88 953 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 BOLA3Q53S33 107 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 KCTD16Q68DU8 428 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 ARCQ7LC44 396 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 MRPL10Q7Z7H8 261 aaKnown RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 MAP7D3Q8IWC1 876 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 B3GALNT2Q8NCR0 500 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 GSTCDQ8NEC7 633 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 OR2W6PQ8NHA6 318 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 SLC2A14Q8TDB8 520 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 HSPH1Q92598 858 aa10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 NKD2Q969F2 451 aaPredicted RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 HNRNPABQ99729 332 aaKnown RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 MAK16Q9BXY0 300 aaKnown RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 AGO3Q9H9G7 860 aaKnown RBP10.58□□□□□ -0.72
EFCAB11-209ENST00000556005 RSAD1Q9HA92 442 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms