RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZMIZ2Q8NF64 920 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 CASP10Q92851 521 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 PCDHB18PQ96TA0 734 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 SEPT5Q99719 369 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-221ENST00000555773 CRISPLD1Q9H336 500 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
SHMT2-221ENST00000555773 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 ASB3Q9Y575 518 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 HCFC2Q9Y5Z7 792 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 KIAA1671Q9BY89 1806 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 VWA8A3KMH1 1905 aa13.17□□□□□ -0.3
SHMT2-221ENST00000555773 GBF1Q92538 1859 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 ZMYND10O75800 440 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 BEST1O76090 585 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 C8AP07357 584 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
SHMT2-221ENST00000555773 SPATA31D3P0C874 917 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 EPCAMP16422 314 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 IGFBP4P22692 258 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 HOXA9P31269 272 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 NOMO3P69849 1222 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 HYAL1Q12794 435 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 DDR2Q16832 855 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 PMF1Q6P1K2 205 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 ALKBH5Q6P6C2 394 aaKnown RBP13.16□□□□□ -0.3
SHMT2-221ENST00000555773 SPATA31D4Q6ZUB0 917 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 PIGZQ86VD9 579 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 MSANTD4Q8NCY6 345 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 VCPIP1Q96JH7 1222 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 ZDHHC7Q9NXF8 308 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 INSL5Q9Y5Q6 135 aa13.16□□□□□ -0.3
SHMT2-221ENST00000555773 NLRC5Q86WI3 1866 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 A0A087X0T9 212 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 HHLA1C9JL84 531 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 TNFRSF10BO14763 440 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 RTN2O75298 545 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 RTN3O95197 1032 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 PAPLNO95428 1278 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 LRG1P02750 347 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 POU2F2P09086 479 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 FAM228BP0C875 321 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 CSH1P0DML2 217 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 CSH2P0DML3 217 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 SSTR3P32745 418 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 NSFP46459 744 aaKnown RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 CDR1P51861 262 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 KIF11P52732 1056 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 CENPCQ03188 943 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 TWF1Q12792 350 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 PDCLQ13371 301 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 ADAM15Q13444 863 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 VEPH1Q14D04 833 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 PPM1LQ5SGD2 360 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 C10orf76Q5T2E6 689 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 NAA35Q5VZE5 725 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 ITIH5Q86UX2 942 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 PHF13Q86YI8 300 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 PASD1Q8IV76 773 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 ELMOD1Q8N336 334 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 DEFB123Q8N688 67 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 TTC9BQ8N6N2 239 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 C1orf131Q8NDD1 294 aaKnown RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 CPA5Q8WXQ8 436 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 ISCUQ9H1K1 167 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 FBXO44Q9H4M3 255 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 LRRC4Q9HBW1 653 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 MAN1C1Q9NR34 630 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 TMEM30AQ9NV96 361 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 IL37Q9NZH6 218 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 NAGPAQ9UK23 515 aa13.15□□□□□ -0.3
SHMT2-221ENST00000555773 EPN1Q9Y6I3 576 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-221ENST00000555773 EIF3CLB5ME19 914 aaKnown RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 TULP2O00295 520 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 XYLBO75191 536 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 SOAT2O75908 522 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 FBXO21O94952 628 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 IPO7O95373 1038 aaKnown RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 LCA5LO95447 670 aa13.14□□□□□ -0.31
SHMT2-221ENST00000555773 FTLP02792 175 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-221ENST00000555773 CALB1P05937 261 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms