RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CHURC1-FNTBB4DL54 471 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
SNX6-205ENST00000555648 CNR2P34972 360 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 FNTBP49356 437 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 NDUFA8P51970 172 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 NOP14P78316 857 aaKnown RBP16.42■□□□□ 0.22
SNX6-205ENST00000555648 SIM2Q14190 667 aaPredicted RBP16.42■□□□□ 0.22
SNX6-205ENST00000555648 ZNF77Q15935 545 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 LPAL2Q16609 132 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 SGSM1Q2NKQ1 1148 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 CEP68Q76N32 757 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 TMC2Q8TDI7 906 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 SLC22A12Q96S37 553 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 P2RY13Q9BPV8 354 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 ZNF518BQ9C0D4 1074 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 XYLT2Q9H1B5 865 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 DPEP3Q9H4B8 488 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 SMYD3Q9H7B4 428 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 ECT2Q9H8V3 914 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 VRTNQ9H8Y1 702 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 DMAC2Q9NW81 257 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 USP18Q9UMW8 372 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 ARHGAP26Q9UNA1 814 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 SLC8A2Q9UPR5 921 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 TCHHQ07283 1943 aa16.42■□□□□ 0.22
SNX6-205ENST00000555648 A0A1W2PQ27 194 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 A0A1W2PQ64 194 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 A0A1W2PQD8 194 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 GOLGA6L4A6NEF3 574 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 RTN3O95197 1032 aaPredicted RBP16.41■□□□□ 0.22
SNX6-205ENST00000555648 PAPSS2O95340 614 aaPredicted RBP16.41■□□□□ 0.22
SNX6-205ENST00000555648 NFATC1O95644 943 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 C4BPAP04003 597 aaKnown RBP16.41■□□□□ 0.22
SNX6-205ENST00000555648 TDGF1P13385 188 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 KRT13P13646 458 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 DRD1P21728 446 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
SNX6-205ENST00000555648 YWHAQP27348 245 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 PIK3CAP42336 1068 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 CDH8P55286 799 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 USP46P62068 366 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 TAF10Q12962 218 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 USP4Q13107 963 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 FBXO43Q4G163 708 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 TMEM196Q5HYL7 178 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 ERMP1Q7Z2K6 904 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 CCDC150Q8NCX0 1101 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 CCDC26Q8TAB7 109 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 TTLL2Q9BWV7 592 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 DNAI2Q9GZS0 605 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
SNX6-205ENST00000555648 GCNT4Q9P109 453 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
SNX6-205ENST00000555648 ZNF840PA6NDX5 716 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 OTOL1A6NHN0 477 aaPredicted RBP16.4■□□□□ 0.22
SNX6-205ENST00000555648 CLDN5O00501 218 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 IKBKBO14920 756 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 GJA4P35212 333 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 RAP1GAPP47736 663 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 GALK1P51570 392 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 VAMP7P51809 220 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 CLDN10P78369 228 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 BECN1Q14457 450 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 LAIR1Q6GTX8 287 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 FSTL4Q6MZW2 842 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 KRBA2Q6ZNG9 492 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.4■□□□□ 0.22
SNX6-205ENST00000555648 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 TMEM174Q8WUU8 243 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 TAF4BQ92750 862 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 CD101Q93033 1021 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 CHAMP1Q96JM3 812 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
SNX6-205ENST00000555648 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 TICRRQ7Z2Z1 1910 aa16.4■□□□□ 0.22
SNX6-205ENST00000555648 LEFTY2O00292 366 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 SLC9A3R1O14745 358 aaPredicted RBP16.39■□□□□ 0.21
SNX6-205ENST00000555648 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 EGFP01133 1207 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 PRR29P0C7W0 189 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 MBL2P11226 248 aaPredicted RBP16.39■□□□□ 0.21
SNX6-205ENST00000555648 TCF3P15923 654 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 SDHBP21912 280 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 NR2F2P24468 414 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 DLG4P78352 724 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 LMNB2Q03252 620 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 PUM1Q14671 1186 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNX6-205ENST00000555648 EML3Q32P44 896 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 ZACNQ401N2 412 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
SNX6-205ENST00000555648 SV2AQ7L0J3 742 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 FAM35AQ86V20 835 aa16.39■□□□□ 0.21
SNX6-205ENST00000555648 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms