RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TLR5O60602 858 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 MYBP10242 640 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 CLCN2P51788 898 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 GTF2H3Q13889 308 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 E2F2Q14209 437 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 RGS7BPQ6MZT1 257 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-216ENST00000555550 ANKRD16Q6P6B7 361 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 FAM109AQ8N4B1 249 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 NRACQ8N912 160 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 ASB2Q96Q27 587 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 P2RX7Q99572 595 aaKnown RBP4.77□□□□□ -1.65
SCFD1-216ENST00000555550 ACO2Q99798 780 aaKnown RBP4.77□□□□□ -1.65
SCFD1-216ENST00000555550 PTDSS2Q9BVG9 487 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 TRNAU1APQ9NX07 287 aaKnown RBP4.77□□□□□ -1.65
SCFD1-216ENST00000555550 XPR1Q9UBH6 696 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 CCNL1Q9UK58 526 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-216ENST00000555550 NOB1Q9ULX3 412 aaKnown RBP4.77□□□□□ -1.65
SCFD1-216ENST00000555550 SHOC2Q9UQ13 582 aa4.77□□□□□ -1.65
SCFD1-216ENST00000555550 SHROOM4Q9ULL8 1493 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 A0A088AWK7 358 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 H3BML4 177 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 SLC16A3O15427 465 aaKnown RBP4.76□□□□□ -1.65
SCFD1-216ENST00000555550 MARCH6O60337 910 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 RFPL1O75677 317 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 LIPAP38571 399 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 VIPR2P41587 438 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 PDE1AP54750 535 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 UCP3P55916 312 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 CYP4F2P78329 520 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 KRT17Q04695 432 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 MIDNQ504T8 468 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 MIS18BP1Q6P0N0 1132 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 ZNF783Q6ZMS7 281 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 MAVSQ7Z434 540 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 C8orf58Q8NAV2 365 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 ZBTB34Q8NCN2 500 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 PRSS3P2Q8NHM4 247 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 SLC35G2Q8TBE7 412 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 GLOD4Q9HC38 313 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 MED16Q9Y2X0 877 aa4.76□□□□□ -1.65
SCFD1-216ENST00000555550 CTNND1O60716 968 aaKnown RBP4.75□□□□□ -1.65
SCFD1-216ENST00000555550 S100BP04271 92 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-216ENST00000555550 THP07101 528 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 KITP10721 976 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 ENGP17813 658 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 PPIFP30405 207 aaKnown RBP4.75□□□□□ -1.65
SCFD1-216ENST00000555550 HOXA4Q00056 320 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-216ENST00000555550 SP2Q02086 613 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 TREML2Q5T2D2 321 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 LMBRD2Q68DH5 695 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-216ENST00000555550 MPP5Q8N3R9 675 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 LRRC71Q8N4P6 559 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 SLC15A4Q8N697 577 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 CYP2W1Q8TAV3 490 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 ATG4AQ8WYN0 398 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 MRGPRX1Q96LB2 322 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 NT5C1BQ96P26 610 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 TAAR9Q96RI9 348 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 KLHL13Q9P2N7 655 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 GABBR1Q9UBS5 961 aa4.75□□□□□ -1.65
SCFD1-216ENST00000555550 NDRG4Q9ULP0 352 aaKnown RBP4.75□□□□□ -1.65
SCFD1-216ENST00000555550 WDR17Q8IZU2 1322 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 TTC3P53804 2025 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 CYSRT1A8MQ03 144 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 PRR23D1E9PI22 279 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 hCG_1984214I3L0E3 225 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 SOCS2O14508 198 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 FESP07332 822 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 PRR23D2P0DMB1 279 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 U2AF1L5P0DN76 240 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 XRCC6P12956 609 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 LRPAP1P30533 357 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 SLC11A2P49281 568 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 U2AF1Q01081 240 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 MGAT5BQ3V5L5 792 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 ANO6Q4KMQ2 910 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 B3GNT9Q6UX72 402 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 MEPCEQ7L2J0 689 aaKnown RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 EPM2AIP1Q7L775 607 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 DTX2Q86UW9 622 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 CHPFQ8IZ52 775 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 DNAJC5GQ8N7S2 189 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 OR6B3Q8NGW1 331 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 NSMCE1Q8WV22 266 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 XAGE5Q8WWM1 108 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 ZMAT3Q9HA38 289 aaKnown RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 DUSP22Q9NRW4 184 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 ZSCAN32Q9NX65 697 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 WWOXQ9NZC7 414 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 SSX2IPQ9Y2D8 614 aa4.74□□□□□ -1.65
SCFD1-216ENST00000555550 MRPS17Q9Y2R5 130 aaKnown RBP4.74□□□□□ -1.65
SCFD1-216ENST00000555550 BTN3A1O00481 513 aa4.73□□□□□ -1.65
SCFD1-216ENST00000555550 PHGDHO43175 533 aaKnown RBP4.73□□□□□ -1.65
SCFD1-216ENST00000555550 TBC1D4O60343 1298 aa4.73□□□□□ -1.65
SCFD1-216ENST00000555550 CYP2C9P11712 490 aa4.73□□□□□ -1.65
SCFD1-216ENST00000555550 NPR1P16066 1061 aa4.73□□□□□ -1.65
SCFD1-216ENST00000555550 PRKAG1P54619 331 aa4.73□□□□□ -1.65
SCFD1-216ENST00000555550 GPSM2P81274 684 aa4.73□□□□□ -1.65
SCFD1-216ENST00000555550 PPP2R5AQ15172 486 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms