RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 XAGE5Q8WWM1 108 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 IGFBPL1Q8WX77 278 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 MESP1Q9BRJ9 268 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 XPR1Q9UBH6 696 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 PLEKHM1Q9Y4G2 1056 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 NOTCH4Q99466 2003 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 EXOC3O60645 756 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 PRF1P14222 555 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 ADORA2AP29274 412 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 GPSM2P81274 684 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 MYO1EQ12965 1108 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 C10orf25Q5T742 122 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 L1TD1Q5T7N2 865 aaKnown RBP4.62□□□□□ -1.67
SNX6-204ENST00000555541 LAYNQ6UX15 382 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 BCDIN3DQ7Z5W3 292 aaKnown RBP4.62□□□□□ -1.67
SNX6-204ENST00000555541 RBMXL3Q8N7X1 1067 aaKnown RBP4.62□□□□□ -1.67
SNX6-204ENST00000555541 PRSS3P2Q8NHM4 247 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 MARK4Q96L34 752 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 ASPSCR1Q9BZE9 553 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 CXorf36Q9H7Y0 433 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 SPEF1Q9Y4P9 236 aa4.62□□□□□ -1.67
SNX6-204ENST00000555541 ADAM10O14672 748 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 A1BGP04217 495 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 ALDH5A1P51649 535 aaPredicted RBP4.61□□□□□ -1.67
SNX6-204ENST00000555541 PSG6Q00889 435 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 GTF2H3Q13889 308 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 RBMS2Q15434 407 aaKnown RBP4.61□□□□□ -1.67
SNX6-204ENST00000555541 AMOTQ4VCS5 1084 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 CATIPQ7Z7H3 387 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 MRPL10Q7Z7H8 261 aaKnown RBP4.61□□□□□ -1.67
SNX6-204ENST00000555541 ABRAQ8N0Z2 381 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 PCSK9Q8NBP7 692 aaKnown RBP4.61□□□□□ -1.67
SNX6-204ENST00000555541 PLBD2Q8NHP8 589 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 PNISRQ8TF01 805 aaKnown RBP4.61□□□□□ -1.67
SNX6-204ENST00000555541 GTPBP4Q9BZE4 634 aaKnown RBP4.61□□□□□ -1.67
SNX6-204ENST00000555541 CIPCQ9C0C6 399 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 PCDH12Q9NPG4 1184 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 WWOXQ9NZC7 414 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 PCDHA6Q9UN73 950 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 COL4A3BPQ9Y5P4 624 aa4.61□□□□□ -1.67
SNX6-204ENST00000555541 H3BUI4 141 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 VNN1O95497 513 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 GRPP07492 148 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 CCND1P24385 295 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 RECQLP46063 649 aaPredicted RBP4.6□□□□□ -1.67
SNX6-204ENST00000555541 PDE6CP51160 858 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 TPTEP56180 551 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 SRSF1Q07955 248 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNX6-204ENST00000555541 PGS1Q32NB8 556 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 SHC4Q6S5L8 630 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 KRT78Q8N1N4 520 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 BRIX1Q8TDN6 353 aaKnown RBP4.6□□□□□ -1.67
SNX6-204ENST00000555541 SLC35A4Q96G79 324 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 MRGPRX1Q96LB2 322 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 PRR25Q96S07 402 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 SMAD5Q99717 465 aaKnown RBP4.6□□□□□ -1.67
SNX6-204ENST00000555541 FAM118BQ9BPY3 351 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 EFHD1Q9BUP0 239 aa4.6□□□□□ -1.67
SNX6-204ENST00000555541 AP4M1O00189 453 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 USP1O94782 785 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 DLDP09622 509 aaKnown RBP4.59□□□□□ -1.67
SNX6-204ENST00000555541 KCNA3P22001 575 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 LRPAP1P30533 357 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 THBS4P35443 961 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 DGKEP52429 567 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 UCP3P55916 312 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 E2F1Q01094 437 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 FAM187BQ17R55 369 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 TMEM240Q5SV17 173 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 DEPDC1Q5TB30 811 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 DPY19L3Q6ZPD9 716 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 ADAMTS18Q8TE60 1221 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 CAMK1GQ96NX5 476 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 MED16Q9Y2X0 877 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 SNX14Q9Y5W7 946 aa4.59□□□□□ -1.67
SNX6-204ENST00000555541 MYMKA6NI61 221 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 ERVV-2B6SEH9 535 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 FGAP02671 866 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 ALDH2P05091 517 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 PRKCBP05771 671 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 MYCLP12524 364 aaPredicted RBP4.58□□□□□ -1.68
SNX6-204ENST00000555541 SLC11A2P49281 568 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 PLCD1P51178 756 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 NANOS2P60321 138 aaKnown RBP4.58□□□□□ -1.68
SNX6-204ENST00000555541 CERKLQ49MI3 558 aaPredicted RBP4.58□□□□□ -1.68
SNX6-204ENST00000555541 KIAA1161Q6NSJ0 714 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 CAND1Q86VP6 1230 aaKnown RBP4.58□□□□□ -1.68
SNX6-204ENST00000555541 IZUMO1Q8IYV9 350 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 NSMCE1Q8WV22 266 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 OSCP1Q8WVF1 389 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 CTHRC1Q96CG8 243 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 RSPRY1Q96DX4 576 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 MOGAT1Q96PD6 335 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 SIGLEC11Q96RL6 698 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 SHOC2Q9UQ13 582 aa4.58□□□□□ -1.68
SNX6-204ENST00000555541 UBE2Q2LH0YL09 131 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 DTNBO60941 627 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 ABLIM3O94929 683 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 SNUPNO95149 360 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms