RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C17orf80Q9BSJ5 609 aa14.47□□□□□ -0.09
VTI1B-204ENST00000554659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.47□□□□□ -0.09
VTI1B-204ENST00000554659 ZBTB39O15060 712 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 AKAP3O75969 853 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 PDE5AO76074 875 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 TGM2P21980 687 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 OTUD4Q01804 1114 aaKnown RBP14.46□□□□□ -0.09
VTI1B-204ENST00000554659 EFCAB12Q6NXP0 572 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 LAYNQ6UX15 382 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 JADE3Q92613 823 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 ZCWPW1Q9H0M4 648 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 PKP3Q9Y446 797 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 RPS6KL1Q9Y6S9 549 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 V9GYQ6 96 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 SDR42E2A6NKP2 422 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 FKBP6O75344 327 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 LSM8O95777 96 aaKnown RBP14.46□□□□□ -0.09
VTI1B-204ENST00000554659 ICAM1P05362 532 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 SPOCD1Q6ZMY3 1216 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 ATXN2LQ8WWM7 1075 aaKnown RBP14.46□□□□□ -0.09
VTI1B-204ENST00000554659 PLEKHA8Q96JA3 519 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 KATNAL1Q9BW62 490 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 LATS2Q9NRM7 1088 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 ERAP1Q9NZ08 941 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 AP4S1Q9Y587 144 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 NBNO60934 754 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 MTFR1Q15390 333 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 AGAP9Q5VTM2 703 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 MFSD14CQ5VZR4 134 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 CCDC81Q6ZN84 652 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 ZNF720Q7Z2F6 126 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 RAB42Q8N4Z0 105 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 SLC25A41Q8N5S1 370 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 LINC00116Q8NCU8 138 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 TMEM120AQ9BXJ8 343 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 IL1RL2Q9HB29 575 aa14.46□□□□□ -0.09
VTI1B-204ENST00000554659 SLIT1O75093 1534 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 FAM205AQ6ZU69 1335 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 KRT87PA6NCN2 255 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 OGTO15294 1046 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 RIPK2O43353 540 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 ITGB3P05106 788 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 MTDHQ86UE4 582 aaKnown RBP14.46□□□□□ -0.1
VTI1B-204ENST00000554659 DDHD1Q8NEL9 900 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 USE1Q9NZ43 259 aa14.46□□□□□ -0.1
VTI1B-204ENST00000554659 IQGAP1P46940 1657 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 ZC3H4Q9UPT8 1303 aaKnown RBP14.45□□□□□ -0.1
VTI1B-204ENST00000554659 PIK3CDO00329 1044 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 ARIH2O95376 493 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 GRK2P25098 689 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 SNX17Q15036 470 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 ANGPT1Q15389 498 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 FAXCQ5TGI0 409 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 BNC2Q6ZN30 1099 aaPredicted RBP14.45□□□□□ -0.1
VTI1B-204ENST00000554659 TAAR1Q96RJ0 339 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 CBWD1Q9BRT8 395 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 VPS9D1Q9Y2B5 631 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 GOLGA8TH3BQL2 631 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 DLGAP3O95886 979 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 RRM1P23921 792 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 TMC3Q7Z5M5 1100 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 LRRC71Q8N4P6 559 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 CGRRF1Q99675 332 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 BRD8Q9H0E9 1235 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 SLC25A27O95847 323 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 VDRP11473 427 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 RASA2Q15283 850 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 CLEC16AQ2KHT3 1053 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 HORMAD1Q86X24 394 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 HPS4Q9NQG7 708 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 GDF3Q9NR23 364 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 DPYSL4O14531 572 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 SOAT2O75908 522 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 NAMPTP43490 491 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 AQP5P55064 265 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 ST3GAL1Q11201 340 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 SYTL3Q4VX76 610 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 SPDYCQ5MJ68 293 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 WASHC2DQ5SRD0 308 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 PKN3Q6P5Z2 889 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 ANKS3Q6ZW76 656 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 LRRN4CLQ8ND94 238 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 FOPNLQ96NB1 174 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 ZSCAN32Q9NX65 697 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 APPL1Q9UKG1 709 aa14.45□□□□□ -0.1
VTI1B-204ENST00000554659 SLCO1B7G3V0H7 640 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 GEMP55040 296 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 TRMT5Q32P41 509 aaKnown RBP14.44□□□□□ -0.1
VTI1B-204ENST00000554659 DENND1BQ6P3S1 775 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 DENND5BQ6ZUT9 1274 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 SAMD3Q8N6K7 520 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 ZBTB10Q96DT7 871 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 SHCBP1LQ9BZQ2 653 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 SEMA4AQ9H3S1 761 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 SOX13Q9UN79 622 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 AFF2P51816 1311 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 CNTNAP4Q9C0A0 1308 aa14.44□□□□□ -0.1
VTI1B-204ENST00000554659 FAM200BP0CF97 657 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms