RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CALM2P0DP24 149 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CALM3P0DP25 149 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 UBA1P22314 1058 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CCND2P30279 289 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 ICAM3P32942 547 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CYP2C18P33260 490 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 GNAQP50148 359 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 RCAN1P53805 252 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 MRPS9P82933 396 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 IRF9Q00978 393 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 TRAF1Q13077 416 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 PPIGQ13427 754 aaKnown RBP eCLIP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 TOP3AQ13472 1001 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 STXBP2Q15833 593 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 LY6KQ17RY6 165 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 APOA5Q6Q788 366 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 USP17L6PQ6QN14 398 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 Q7L0L9 218 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 SESTD1Q86VW0 696 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 REXO1L1PQ8IX06 675 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 GIMAP8Q8ND71 665 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 KAT2BQ92831 832 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 RRP36Q96EU6 259 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 BORCS6Q96GS4 357 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 RNPC3Q96LT9 517 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 GBP4Q96PP9 640 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 CTAGE1Q96RT6 745 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 SEZ6LQ9BYH1 1024 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 TRPV6Q9H1D0 765 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 ALDH8A1Q9H2A2 487 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 TNPO3Q9Y5L0 923 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 SNX14Q9Y5W7 946 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 SLC4A7Q9Y6M7 1214 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 GBF1Q92538 1859 aa4.75□□□□□ -1.65
VTI1B-203ENST00000554636 SPTBN5Q9NRC6 3674 aaKnown RBP4.75□□□□□ -1.65
VTI1B-203ENST00000554636 hCG_1642624A0A1W2PR95 340 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 GOLGA8AA7E2F4 631 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 GOLGA8BA8MQT2 603 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 HAS3O00219 553 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 PLD2O14939 933 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 KPNA6O60684 536 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 GGPS1O95749 300 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 ZNF286BP0CG31 522 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 CYP2C9P11712 490 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 MYCLP12524 364 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 CPA1P15085 419 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 CSF2RAP15509 400 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 IGFALSP35858 605 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 STAT5BP51692 787 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 SMAD3P84022 425 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 SP2Q02086 613 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 KRT32Q14532 448 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 UBE2SQ16763 222 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 C21orf62-AS1Q17RA5 79 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 RNF151Q2KHN1 245 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 BRDTQ58F21 947 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 TMEM240Q5SV17 173 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 CELF3Q5SZQ8 465 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 FAM109BQ6ICB4 259 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 NFRKBQ6P4R8 1299 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 PSRC1Q6PGN9 363 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 LARP4Q71RC2 724 aaKnown RBP eCLIP4.74□□□□□ -1.654e-7■□□□□ 8.1
VTI1B-203ENST00000554636 DDX53Q86TM3 631 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 TAX1BP1Q86VP1 789 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 FBXL16Q8N461 479 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 DEFB123Q8N688 67 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 TTC9BQ8N6N2 239 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 FANCBQ8NB91 859 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 PPTC7Q8NI37 304 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 HERVK_113Q902F9 699 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 DVL3Q92997 716 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 NEIL1Q96FI4 390 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 DRC1Q96MC2 740 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 JAKMIP1Q96N16 626 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 GUCD1Q96NT3 240 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 INPP4AQ96PE3 977 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 DPYSL5Q9BPU6 564 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 AGXT2Q9BYV1 514 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 KLC2Q9H0B6 622 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 OR10A5Q9H207 317 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 C12orf65Q9H3J6 166 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 HIPK3Q9H422 1215 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 IL23AQ9NPF7 189 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 RBM28Q9NW13 759 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 SEC63Q9UGP8 760 aaKnown RBP4.74□□□□□ -1.65
VTI1B-203ENST00000554636 NR2E1Q9Y466 385 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 B3GALT1Q9Y5Z6 326 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 PTPRSQ13332 1948 aa4.74□□□□□ -1.65
VTI1B-203ENST00000554636 CHD7Q9P2D1 2997 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 KLF18A0A0U1RQI7 1052 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 ZBTB43O43298 467 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 FIBPO43427 364 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 EPB41L2O43491 1005 aaKnown RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 CUTAO60888 179 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 STAM2O75886 525 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
VTI1B-203ENST00000554636 REC8O95072 547 aa4.73□□□□□ -1.65
VTI1B-203ENST00000554636 ASMTLO95671 621 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms