RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 PKN3Q6P5Z2 889 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 CBWD2Q8IUF1 395 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 PLEKHO2Q8TD55 490 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 SLC46A2Q9BY10 475 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 ARRDC1-AS1Q9H2J1 176 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 IL21Q9HBE4 155 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 ABI2Q9NYB9 513 aaPredicted RBP14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 LIMA1Q9UHB6 759 aaKnown RBP14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 AGO2Q9UKV8 859 aaKnown RBP14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 DSEQ9UL01 958 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 DERAQ9Y315 318 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 TSC2P49815 1807 aa14.99□□□□□ -0.01
SPTLC2-202ENST00000554365 GOLGA6L3A6NEY3 463 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 KCNJ18B7U540 433 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 KIAA0391O15091 583 aaKnown RBP14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 MAPK13O15264 365 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 EXOC3O60645 756 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 FGFR1OPO95684 399 aaKnown RBP14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 WEE1P30291 646 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 HOXA6P31267 233 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 AVPR1AP37288 418 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 TAF6P49848 677 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 WNT7BP56706 349 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 KCNJ12Q14500 433 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 SF3A2Q15428 464 aaKnown RBP14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 ST3GAL2Q16842 350 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 CEP135Q66GS9 1140 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 IL31Q6EBC2 164 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 CMTM8Q8IZV2 173 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 GPD1LQ8N335 351 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 C12orf50Q8NA57 414 aaPredicted RBP14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
SPTLC2-202ENST00000554365 LRRC10BA6NIK2 292 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 RPP40O75818 363 aaKnown RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 GNA14O95837 355 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 HAPLN1P10915 354 aaPredicted RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 EEF1GP26641 437 aaKnown RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 PSMC2P35998 433 aaKnown RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 GRSF1Q12849 480 aaKnown RBP eCLIP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 BFSP1Q12934 665 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 RUNX3Q13761 415 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 KRT31Q15323 416 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 SNRNP35Q16560 246 aaKnown RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 C1orf220Q5T0J3 134 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 WSCD1Q658N2 575 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 LRRTM3Q86VH5 581 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 TRIM59Q8IWR1 403 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 FAM186BQ8IYM0 893 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 MAB21L3Q8N8X9 362 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 SPPL2BQ8TCT7 592 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 C2orf15Q8WU43 125 aaKnown RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 GAB3Q8WWW8 586 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 FAM213AQ9BRX8 229 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 EBF3Q9H4W6 596 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 ASB7Q9H672 318 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 DPP3Q9NY33 737 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 SLC8A2Q9UPR5 921 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 EPG5Q9HCE0 2579 aa14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 KIF26AQ9ULI4 1882 aaPredicted RBP14.97□□□□□ -0.01
SPTLC2-202ENST00000554365 EPB41P11171 864 aaKnown RBP14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 FANCCQ00597 558 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 CACNA1BQ00975 2339 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 CYP24A1Q07973 514 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 SMARCB1Q12824 385 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 TMEM196Q5HYL7 178 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 MIIPQ5JXC2 388 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 FSTL4Q6MZW2 842 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 SARM1Q6SZW1 724 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 CACNA2D4Q7Z3S7 1137 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 FAM114A1Q8IWE2 563 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 DCP1BQ8IZD4 617 aaKnown RBP14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 RDH13Q8NBN7 331 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 STKLD1Q8NE28 680 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 TTC16Q8NEE8 873 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 FAM83CQ9BQN1 747 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 KIAA1586Q9HCI6 787 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 HPS4Q9NQG7 708 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 TAB2Q9NYJ8 693 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 MAGED2Q9UNF1 606 aaPredicted RBP14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 FRMD4BQ9Y2L6 1034 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 C2CD2Q9Y426 696 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 PCDHB5Q9Y5E4 795 aa14.96□□□□□ -0.01
SPTLC2-202ENST00000554365 OTOL1A6NHN0 477 aaPredicted RBP14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 ZNF233A6NK53 670 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 KPNA7A9QM74 516 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 ATG13O75143 517 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 RNF40O75150 1001 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 EGFP01133 1207 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 F11P03951 625 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 GPR15P49685 360 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 COPB1P53618 953 aaKnown RBP14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 TPM4P67936 248 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 SV2CQ496J9 727 aa14.95□□□□□ -0.02
SPTLC2-202ENST00000554365 CCDC40Q4G0X9 1142 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms