RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 C17orf50Q8WW18 174 aa9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 SPATA16Q9BXB7 569 aa9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 PABPC3Q9H361 631 aaKnown RBP9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 RNPEPQ9H4A4 650 aa9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 PTPRHQ9HD43 1115 aa9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
AL049839.2-201ENST00000553947 AGTP01019 485 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 TXNP10599 105 aaKnown RBP9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 CYP2C8P10632 490 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 FGFR4P22455 802 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 SERPINB3P29508 390 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 STX2P32856 288 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 GJC1P36383 396 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 TFAMQ00059 246 aaKnown RBP9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 ADCY1Q08828 1119 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 RCN1Q15293 331 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 TRIP13Q15645 432 aaPredicted RBP9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 ATP13A4Q4VNC1 1196 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 CFAP157Q5JU67 520 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 SCARA5Q6ZMJ2 495 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 PLPPR4Q7Z2D5 763 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 ART4Q93070 314 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 FAM136AQ96C01 138 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 TRIM11Q96F44 468 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 PGM2Q96G03 612 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 KLHL11Q9NVR0 708 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 SPATA7Q9P0W8 599 aa9.46□□□□□ -0.89
AL049839.2-201ENST00000553947 MGAMO43451 1857 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 RASGRF2O14827 1237 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 TLR3O15455 904 aaKnown RBP9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 RALAP11233 206 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 PROZP22891 400 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 SLC1A1P43005 524 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 KRT17Q04695 432 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 PPIL2Q13356 520 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 MXD4Q14582 209 aaPredicted RBP9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 SLC44A4Q53GD3 710 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 ZBTB8OSQ8IWT0 167 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 WDTC1Q8N5D0 677 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 TFAP2BQ92481 460 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 STMN2Q93045 179 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 TBC1D10AQ9BXI6 508 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 INO80BQ9C086 356 aaPredicted RBP9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 MIS12Q9H081 205 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 CISHQ9NSE2 258 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 GMEB1Q9Y692 573 aa9.46□□□□□ -0.9
AL049839.2-201ENST00000553947 CCDC160A6NGH7 325 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 MAP3K7O43318 606 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 OPHN1O60890 802 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 LMNAP02545 664 aaKnown RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 CCDC166P0CW27 439 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 YBX3P16989 372 aaKnown RBP eCLIP9.45□□□□□ -0.91e-9■□□□□ 8.5
AL049839.2-201ENST00000553947 RASSF2P50749 326 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 SH3BGRP55822 239 aaPredicted RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 IGBP1P78318 339 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 ZNF252P-AS1Q0IIN9 211 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 CMPK2Q5EBM0 449 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 EFCAB12Q6NXP0 572 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 TRIM72Q6ZMU5 477 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 RINLQ6ZS11 566 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 ZBTB8BQ8NAP8 495 aaPredicted RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 NMD3Q96D46 503 aaKnown RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 IMPG2Q9BZV3 1241 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 DCLK3Q9C098 648 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 XYLT2Q9H1B5 865 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 FZD8Q9H461 694 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 DENND2DQ9H6A0 471 aaPredicted RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 AAASQ9NRG9 546 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 POLIQ9UNA4 740 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 COMMD3-BMI1R4GMX3 469 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 PASKQ96RG2 1323 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 TMEM120BA0PK00 339 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 CAPN9O14815 690 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 ATP5HO75947 161 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 NUDT17P0C025 328 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 CCNB1P14635 433 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 MMP8P22894 467 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 IVDP26440 423 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 SKIV2L2P42285 1042 aaKnown RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 ASPAP45381 313 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 OGDHQ02218 1023 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 C1QBPQ07021 282 aaKnown RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 KLF1Q13351 362 aaPredicted RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 KPNB1Q14974 876 aaKnown RBP9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 DUOXA2Q1HG44 320 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 PARP6Q2NL67 630 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 ZNF568Q3ZCX4 644 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 LIN9Q5TKA1 542 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 ATF7IP2Q5U623 682 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 C9orf131Q5VYM1 1079 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 MPZL3Q6UWV2 235 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 TSHZ1Q6ZSZ6 1077 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 PRUNE1Q86TP1 453 aa9.45□□□□□ -0.9
AL049839.2-201ENST00000553947 CCDC25Q86WR0 208 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms