RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 MYH10P35580 1976 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 PSMC2P35998 433 aaKnown RBP18.85■□□□□ 0.61
FOXN3-204ENST00000553840 PIK3CAP42336 1068 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 CDH8P55286 799 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 ADAM9Q13443 819 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 PDGFRLQ15198 375 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 SV2AQ7L0J3 742 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 TTC16Q8NEE8 873 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 SLITRK1Q96PX8 696 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 CYP2S1Q96SQ9 504 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 MED10Q9BTT4 135 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 DNAI2Q9GZS0 605 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 SMYD3Q9H7B4 428 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 PRMT8Q9NR22 394 aaPredicted RBP18.85■□□□□ 0.61
FOXN3-204ENST00000553840 HOOK1Q9UJC3 728 aaKnown RBP18.85■□□□□ 0.61
FOXN3-204ENST00000553840 NME7Q9Y5B8 376 aa18.85■□□□□ 0.61
FOXN3-204ENST00000553840 VNN1O95497 513 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 CXCL12P48061 93 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 ENPEPQ07075 957 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 MTF1Q14872 753 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 PON2Q15165 354 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 SCARA5Q6ZMJ2 495 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 SYNPOQ8N3V7 929 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 SPEM1Q8N4L4 309 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 CPA6Q8N4T0 437 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 ARL14EPQ8N8R7 260 aaPredicted RBP18.84■□□□□ 0.61
FOXN3-204ENST00000553840 HINFPQ9BQA5 517 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 TTLL2Q9BWV7 592 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 B3GNT5Q9BYG0 378 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 ZNF518BQ9C0D4 1074 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 EBF3Q9H4W6 596 aa18.84■□□□□ 0.61
FOXN3-204ENST00000553840 USP34Q70CQ2 3546 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 C2orf78A6NCI8 922 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 AKAP3O75969 853 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 RTN3O95197 1032 aaPredicted RBP18.83■□□□□ 0.6
FOXN3-204ENST00000553840 SMC2O95347 1197 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 RAP1GAPP47736 663 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 IFNAR2P48551 515 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 USP46P62068 366 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 EDRF1Q3B7T1 1238 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 TXNDC11Q6PKC3 985 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 TSSK4Q6SA08 328 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 UNC93AQ86WB7 457 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 NUP93Q8N1F7 819 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 ZBTB44Q8NCP5 570 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 SMARCD1Q96GM5 515 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 SLC22A12Q96S37 553 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.6
FOXN3-204ENST00000553840 DUS2Q9NX74 493 aaKnown RBP18.83■□□□□ 0.6
FOXN3-204ENST00000553840 GCNT4Q9P109 453 aa18.83■□□□□ 0.6
FOXN3-204ENST00000553840 CLDN5O00501 218 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 ABL1P00519 1130 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 ASS1P00966 412 aaKnown RBP18.82■□□□□ 0.6
FOXN3-204ENST00000553840 HLA-DRAP01903 254 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 GRSF1Q12849 480 aaKnown RBP eCLIP18.82■□□□□ 0.6
FOXN3-204ENST00000553840 IFRD2Q12894 506 aaPredicted RBP18.82■□□□□ 0.6
FOXN3-204ENST00000553840 NR1H3Q13133 447 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 PNOCQ13519 176 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 ZNF77Q15935 545 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 TRIM68Q6AZZ1 485 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 FMR1NBQ8N0W7 255 aaPredicted RBP18.82■□□□□ 0.6
FOXN3-204ENST00000553840 PDZD8Q8NEN9 1154 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 OSCP1Q8WVF1 389 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 NELL1Q92832 810 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 TSG101Q99816 390 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 DMAP1Q9NPF5 467 aaPredicted RBP18.82■□□□□ 0.6
FOXN3-204ENST00000553840 HPS4Q9NQG7 708 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 ARHGAP26Q9UNA1 814 aa18.82■□□□□ 0.6
FOXN3-204ENST00000553840 CETN3O15182 167 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 STX10O60499 249 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 TCF3P15923 654 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 YWHAQP27348 245 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 GCLMP48507 274 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 TAF10Q12962 218 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 USP4Q13107 963 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 ACOT1Q86TX2 421 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 FAM35AQ86V20 835 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 SH3RF2Q8TEC5 729 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 RUBCNQ92622 972 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 SECISBP2LQ93073 1101 aaKnown RBP18.81■□□□□ 0.6
FOXN3-204ENST00000553840 ATP2A3Q93084 1043 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 SDCBP2Q9H190 292 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
FOXN3-204ENST00000553840 RBM12Q9NTZ6 932 aaKnown RBP18.81■□□□□ 0.6
FOXN3-204ENST00000553840 ZNF840PA6NDX5 716 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 ATG13O75143 517 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 TRIM49P0CI25 452 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 TRIM49CP0CI26 452 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 EPB41P11171 864 aaKnown RBP18.8■□□□□ 0.6
FOXN3-204ENST00000553840 ARSAP15289 507 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 GTF2H1P32780 548 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 NDST1P52848 882 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 CCINQ13939 588 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 ZCWPW2Q504Y3 356 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 C1orf220Q5T0J3 134 aa18.8■□□□□ 0.6
FOXN3-204ENST00000553840 ZNF658Q5TYW1 1059 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms