RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 TK2O00142 265 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 JAK2O60674 1132 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 KAT7O95251 611 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 CYP2F1P24903 491 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 EIF2DP41214 584 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 NCKAP1LP55160 1127 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 RPL6Q02878 288 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 BYSLQ13895 437 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 PDIA5Q14554 519 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 DHCR24Q15392 516 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 IL17AQ16552 155 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 EOGTQ5NDL2 527 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 RHBDF2Q6PJF5 856 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 RABEPKQ7Z6M1 372 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 SCUBE3Q8IX30 993 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 DCP1BQ8IZD4 617 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 THEM5Q8N1Q8 247 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 TTC16Q8NEE8 873 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 SNX29Q8TEQ0 813 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 UBL7Q96S82 380 aaPredicted RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 PNKPQ96T60 521 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 PYM1Q9BRP8 204 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 TIPINQ9BVW5 301 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 RPF1Q9H9Y2 349 aaKnown RBP10.35□□□□□ -0.75
CHD8-205ENST00000553651 ABCB6Q9NP58 842 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 BCCIPQ9P287 314 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHD8-205ENST00000553651 LRWD1Q9UFC0 647 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 PCOLCE2Q9UKZ9 415 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 DERAQ9Y315 318 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 KNTC1P50748 2209 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 CABIN1Q9Y6J0 2220 aa10.35□□□□□ -0.75
CHD8-205ENST00000553651 LEFTY2O00292 366 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 SYPP08247 313 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 HDCP19113 662 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 TNFRSF4P43489 277 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 TAF6P49848 677 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 CYP4F3Q08477 520 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 RAD51AP2Q09MP3 1159 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 TMEM132DQ14C87 1099 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 KYAT1Q16773 422 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 ME3Q16798 604 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 SLC36A4Q6YBV0 504 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 FILIP1Q7Z7B0 1213 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 METTL23Q86XA0 190 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 MIB1Q86YT6 1006 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 CD302Q8IX05 232 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 KIAA1958Q8N8K9 716 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 SPATA18Q8TC71 538 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 GTF3C6Q969F1 213 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 ZNF419Q96HQ0 510 aaPredicted RBP10.34□□□□□ -0.75
CHD8-205ENST00000553651 CD93Q9NPY3 652 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 CALCOCO1Q9P1Z2 691 aa10.34□□□□□ -0.75
CHD8-205ENST00000553651 APOBEC2Q9Y235 224 aaKnown RBP10.34□□□□□ -0.75
CHD8-205ENST00000553651 A0A1W2PQF6 199 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 TRABD2BA6NFA1 517 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 MYMKA6NI61 221 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
CHD8-205ENST00000553651 OLFM2O95897 454 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 APODP05090 189 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 GRIA2P42262 883 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 MATR3P43243 847 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHD8-205ENST00000553651 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
CHD8-205ENST00000553651 SLC7A9P82251 487 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 ATP2C1P98194 919 aaPredicted RBP10.33□□□□□ -0.76
CHD8-205ENST00000553651 BNC1Q01954 994 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 GRIK2Q13002 908 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 NFE2Q16621 373 aaPredicted RBP10.33□□□□□ -0.76
CHD8-205ENST00000553651 TTC38Q5R3I4 469 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 DBX2Q6ZNG2 339 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 OSTM1Q86WC4 334 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 ETFBKMTQ8IXQ9 262 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 HSPA12BQ96MM6 686 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 RNF38Q9H0F5 515 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 DPP3Q9NY33 737 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 L1RE1Q9UN81 338 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 PCDHB9Q9Y5E1 797 aa10.33□□□□□ -0.76
CHD8-205ENST00000553651 NPHP3-ACAD11A0A0J9YXS1 232 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 KPNA7A9QM74 516 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 SCAMP3O14828 347 aaKnown RBP10.32□□□□□ -0.76
CHD8-205ENST00000553651 HCRTO43612 131 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 ATXN1LP0C7T5 689 aaKnown RBP10.32□□□□□ -0.76
CHD8-205ENST00000553651 LIG4P49917 911 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 SMTNP53814 917 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 SLC12A3P55017 1021 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 WNT7BP56706 349 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 USP46P62068 366 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 TSPY1Q01534 308 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 GUCY1B3Q02153 619 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 KDSRQ06136 332 aa10.32□□□□□ -0.76
CHD8-205ENST00000553651 RESTQ13127 1097 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms