RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 ITFG1Q8TB96 612 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 C2orf15Q8WU43 125 aaKnown RBP8.5□□□□□ -1.05
SNRPN-206ENST00000553597 SHC3Q92529 594 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 RPGRIP1Q96KN7 1286 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 ZNF512Q96ME7 567 aaPredicted RBP8.5□□□□□ -1.05
SNRPN-206ENST00000553597 NECAB3Q96P71 396 aaPredicted RBP8.5□□□□□ -1.05
SNRPN-206ENST00000553597 ZSWIM1Q9BR11 485 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 GPR88Q9GZN0 384 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 SLITRK6Q9H5Y7 841 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 DMAP1Q9NPF5 467 aaPredicted RBP8.5□□□□□ -1.05
SNRPN-206ENST00000553597 ASAH2Q9NR71 780 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 SEPT11Q9NVA2 429 aaKnown RBP8.5□□□□□ -1.05
SNRPN-206ENST00000553597 DNMT3BQ9UBC3 853 aaKnown RBP8.5□□□□□ -1.05
SNRPN-206ENST00000553597 HESX1Q9UBX0 185 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 CUL9Q8IWT3 2517 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 TICRRQ7Z2Z1 1910 aa8.5□□□□□ -1.05
SNRPN-206ENST00000553597 PRUNE2Q8WUY3 3088 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 A0A1W2PRU2 124 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 O00370 1275 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 DLL1O00548 723 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 TRIM66O15016 1216 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 TPM3P06753 285 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PAEPP09466 180 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 FAM163BP0C2L3 166 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 VDRP11473 427 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 NPR3P17342 541 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PTPN2P17706 415 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 FSHRP23945 695 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 GABRR2P28476 465 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 SOX5P35711 763 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 CCR2P41597 374 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 MTHFRP42898 656 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 MAGEA11P43364 429 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PDE6CP51160 858 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 ZNF132P52740 706 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 USP46P62068 366 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 MRPS5P82675 430 aaKnown RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 ITIH3Q06033 890 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PDE4CQ08493 712 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 SMARCB1Q12824 385 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 NR1I3Q14994 352 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 UVSSAQ2YD98 709 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 CFAP221Q4G0U5 840 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 ATAT1Q5SQI0 421 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 STXBP5Q5T5C0 1151 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 DENND1BQ6P3S1 775 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 VSTM1Q6UX27 236 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 CLEC20AQ6ZU45 233 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PDZD4Q76G19 769 aaPredicted RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 TMC6Q7Z403 805 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 DNAJB7Q7Z6W7 309 aaPredicted RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 TTC39CQ8N584 583 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 ZMIZ2Q8NF64 920 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 SCAMP5Q8TAC9 235 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 HDAC7Q8WUI4 952 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 SLC20A1Q8WUM9 679 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 SECISBP2LQ93073 1101 aaKnown RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 FUBP3Q96I24 572 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 GCNAQ96QF7 691 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 HNRNPABQ99729 332 aaKnown RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 NAA15Q9BXJ9 866 aaKnown RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 PDCL3Q9H2J4 239 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 TRPC7Q9HCX4 862 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 ABCB6Q9NP58 842 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 MRPS23Q9Y3D9 190 aaKnown RBP8.49□□□□□ -1.05
SNRPN-206ENST00000553597 C5orf42Q9H799 3197 aa8.49□□□□□ -1.05
SNRPN-206ENST00000553597 MIA3Q5JRA6 1907 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 LRRC10BA6NIK2 292 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 LRRC53A6NM62 1247 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 MMEP08473 750 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 CSH1P0DML2 217 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 CSH2P0DML3 217 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 C7P10643 843 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 LCP1P13796 627 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 RFX1P22670 979 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 HOXA9P31269 272 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 CLCN1P35523 988 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 STAT1P42224 750 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 SLC5A3P53794 718 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 BCAT1P54687 386 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 JAM2P57087 298 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 PTK2Q05397 1052 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 ADIGQ0VDE8 80 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 BST2Q10589 180 aaKnown RBP8.48□□□□□ -1.05
SNRPN-206ENST00000553597 TEAD2Q15562 447 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 ASIC2Q16515 512 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 AAK1Q2M2I8 961 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 IER5LQ5T953 404 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 ARHGAP17Q68EM7 881 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 DENND5BQ6ZUT9 1274 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 NOP9Q86U38 636 aaKnown RBP8.48□□□□□ -1.05
SNRPN-206ENST00000553597 ITIH5Q86UX2 942 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 TMC8Q8IU68 726 aa8.48□□□□□ -1.05
SNRPN-206ENST00000553597 TDRD5Q8NAT2 981 aaKnown RBP8.48□□□□□ -1.05
SNRPN-206ENST00000553597 CMASQ8NFW8 434 aaPredicted RBP8.48□□□□□ -1.05
SNRPN-206ENST00000553597 SHKBP1Q8TBC3 707 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms