RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GDAP2Q9NXN4 497 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 MBD1Q9UIS9 605 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-209ENST00000553308 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 NEUROG3Q9Y4Z2 214 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 IGF2RP11717 2491 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 GOLGA8IPA6NC78 632 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 GOLGA8JA6NMD2 632 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 TNFRSF10BO14763 440 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 ALDH1A2O94788 518 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 BDNFP23560 247 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 LMO2P25791 158 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 PCSK1P29120 753 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 DDIT3P35638 169 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 MAGEA11P43364 429 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SIM1P81133 766 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 MRPS21P82921 87 aaKnown RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 KDSRQ06136 332 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 RING1Q06587 406 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 LMAN2Q12907 356 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 ACAP1Q15027 740 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 POSTNQ15063 836 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 DHCR24Q15392 516 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SOWAHAQ2M3V2 549 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 EMC10Q5UCC4 262 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 FAM171BQ6P995 826 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SYT12Q8IV01 421 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 TOP6BLQ8N6T0 577 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SPATA18Q8TC71 538 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 KBTBD7Q8WVZ9 684 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 HMGB4Q8WW32 186 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 MYLPFQ96A32 169 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SYT15Q9BQS2 421 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 STRA6Q9BX79 667 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 NUSAP1Q9BXS6 441 aaKnown RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 MTMR12Q9C0I1 747 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 RNF38Q9H0F5 515 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SLC32A1Q9H598 525 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 CRTAC1Q9NQ79 661 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 SMPD4Q9NXE4 827 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 RBAKQ9NYW8 714 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 TBC1D7Q9P0N9 293 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 ITGA11Q9UKX5 1188 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 LHX6Q9UPM6 363 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 CPQQ9Y646 472 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 ASCC3Q8N3C0 2202 aaKnown RBP9.72□□□□□ -0.85
SYNE2-209ENST00000553308 PLXND1Q9Y4D7 1925 aa9.72□□□□□ -0.85
SYNE2-209ENST00000553308 LAMA1P25391 3075 aa9.71□□□□□ -0.85
SYNE2-209ENST00000553308 TCRBV21S2A2A0A5A6 115 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 MYMKA6NI61 221 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 H3BQV1 296 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 MAP3K13O43283 966 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 EIF5BO60841 1220 aaKnown RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 ADAM23O75077 832 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 KAT7O95251 611 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 APODP05090 189 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 CFIP05156 583 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 TMEM191BP0C7N4 346 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 ITPKAP23677 461 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 LONP1P36776 959 aaKnown RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 GRIK1P39086 918 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 KIR2DL1P43626 348 aaPredicted RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 LHX1P48742 406 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 PDE6CP51160 858 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 CASP5P51878 434 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 SLC7A9P82251 487 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 RESTQ13127 1097 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 L1TD1Q5T7N2 865 aaKnown RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 LYSMD4Q5XG99 296 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 SLC23A3Q6PIS1 610 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 LRSAM1Q6UWE0 723 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 C4orf50Q6ZRC1 276 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 DENND5BQ6ZUT9 1274 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 USP49Q70CQ1 688 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 PIP4P1Q86T03 277 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 ADGRG2Q8IZP9 1017 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 NOC3LQ8WTT2 800 aaKnown RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 CACTINQ8WUQ7 758 aaKnown RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 SPATA17Q96L03 361 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 PNKPQ96T60 521 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 CBWD1Q9BRT8 395 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 FGFBP2Q9BYJ0 223 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 MRPL44Q9H9J2 332 aaKnown RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 PDE11AQ9HCR9 933 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 TRPM5Q9NZQ8 1165 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 MAGEC2Q9UBF1 373 aaPredicted RBP9.71□□□□□ -0.86
SYNE2-209ENST00000553308 PILRBQ9UKJ0 227 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 EXOC7Q9UPT5 735 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 PTPRJQ12913 1337 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 SPEGQ15772 3267 aa9.71□□□□□ -0.86
SYNE2-209ENST00000553308 ADAMTS9Q9P2N4 1935 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 ZNF840PA6NDX5 716 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms