RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 GTF3C4Q9UKN8 822 aa13.89□□□□□ -0.19
VPS29-211ENST00000553128 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
VPS29-211ENST00000553128 PLXND1Q9Y4D7 1925 aa13.89□□□□□ -0.19
VPS29-211ENST00000553128 ANAPC1Q9H1A4 1944 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
VPS29-211ENST00000553128 ANKRD63C9JTQ0 380 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 AP5Z1O43299 807 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 PIGRP01833 764 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 TSPY1Q01534 308 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 ZNF33AQ06730 810 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 KCNB1Q14721 858 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 ANKRD1Q15327 319 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 DHCR24Q15392 516 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 KYAT1Q16773 422 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 OSTM1Q86WC4 334 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 NAXDQ8IW45 347 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 CD302Q8IX05 232 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 SYT2Q8N9I0 419 aaPredicted RBP13.88□□□□□ -0.19
VPS29-211ENST00000553128 LEO1Q8WVC0 666 aaPredicted RBP13.88□□□□□ -0.19
VPS29-211ENST00000553128 ERLEC1Q96DZ1 483 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 PNKPQ96T60 521 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 IKZF4Q9H2S9 585 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
VPS29-211ENST00000553128 HCN2Q9UL51 889 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 L1RE1Q9UN81 338 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 DERAQ9Y315 318 aa13.88□□□□□ -0.19
VPS29-211ENST00000553128 GABRG2P18507 467 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 DPP6P42658 865 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 WNT7BP56706 349 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 USP46P62068 366 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 RPL10AP62906 217 aaKnown RBP13.87□□□□□ -0.19
VPS29-211ENST00000553128 ATP2C1P98194 919 aaPredicted RBP13.87□□□□□ -0.19
VPS29-211ENST00000553128 NFE2Q16621 373 aaPredicted RBP13.87□□□□□ -0.19
VPS29-211ENST00000553128 INTS6LQ5JSJ4 861 aaKnown RBP13.87□□□□□ -0.19
VPS29-211ENST00000553128 EOGTQ5NDL2 527 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 RHBDF2Q6PJF5 856 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 SCN4BQ8IWT1 228 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 PHTF2Q8N3S3 785 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 GLIS3Q8NEA6 775 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 SPATA18Q8TC71 538 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 C8orf76Q96K31 380 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 RNF38Q9H0F5 515 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 ABCB6Q9NP58 842 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 CD93Q9NPY3 652 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 DDX43Q9NXZ2 648 aaKnown RBP13.87□□□□□ -0.19
VPS29-211ENST00000553128 CALCOCO1Q9P1Z2 691 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 C2CD2Q9Y426 696 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 STK24Q9Y6E0 443 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 HELZP42694 1942 aaKnown RBP13.87□□□□□ -0.19
VPS29-211ENST00000553128 TCHHQ07283 1943 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 ACACAQ13085 2346 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 MYH11P35749 1972 aa13.87□□□□□ -0.19
VPS29-211ENST00000553128 A0A0A0MRY4 1105 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 IGHV1OR15-9A0A0B4J2B8 117 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 MYMKA6NI61 221 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 K7ENM7 598 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 CBFA2T3O75081 653 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 C1QL1O75973 258 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 APODP05090 189 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 PLA2G4BP0C869 781 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 RESTQ13127 1097 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 HNRNPDQ14103 355 aaKnown RBP13.86□□□□□ -0.19
VPS29-211ENST00000553128 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 MIB1Q86YT6 1006 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 KCNN1Q92952 543 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 HSPA12BQ96MM6 686 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 REEP2Q9BRK0 252 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 ASB7Q9H672 318 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 ARHGEF4Q9NR80 690 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 SMPD4Q9NXE4 827 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 LARSQ9P2J5 1176 aaKnown RBP13.86□□□□□ -0.19
VPS29-211ENST00000553128 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 PCDHB9Q9Y5E1 797 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 TENM4Q6N022 2769 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 CEP192Q8TEP8 1941 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 ASXL3Q9C0F0 2248 aa13.86□□□□□ -0.19
VPS29-211ENST00000553128 MAOBP27338 520 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 WASP42768 502 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 SLC14A1Q13336 389 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 BYSLQ13895 437 aaKnown RBP13.85□□□□□ -0.19
VPS29-211ENST00000553128 SV2CQ496J9 727 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 HSF5Q4G112 596 aaPredicted RBP13.85□□□□□ -0.19
VPS29-211ENST00000553128 HYIQ5T013 277 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 CRELD2Q6UXH1 353 aaPredicted RBP13.85□□□□□ -0.19
VPS29-211ENST00000553128 TRIML1Q8N9V2 468 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 FIZ1Q96SL8 496 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 SLC6A17Q9H1V8 727 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 CYP8B1Q9UNU6 501 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 CPQQ9Y646 472 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 PTPRBP23467 1997 aa13.85□□□□□ -0.19
VPS29-211ENST00000553128 A0A1W2PQF6 199 aa13.84□□□□□ -0.19
VPS29-211ENST00000553128 H0YCG3 227 aa13.84□□□□□ -0.19
VPS29-211ENST00000553128 TRIM24O15164 1050 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms