RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 EMC1Q8N766 993 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 PKMYT1Q99640 499 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 COLEC11Q9BWP8 271 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 KRT82Q9NSB4 513 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 ARGLU1Q9NWB6 273 aaPredicted RBP13.35□□□□□ -0.27
CACNB3-223ENST00000552480 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 DDX56Q9NY93 547 aaKnown RBP13.35□□□□□ -0.27
CACNB3-223ENST00000552480 RAB21Q9UL25 225 aa13.35□□□□□ -0.27
CACNB3-223ENST00000552480 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 MICAL3Q7RTP6 2002 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 GOLGA6L10A0A0M3HER8 536 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 TBKBP1A7MCY6 615 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 NRP1O14786 923 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 TADA2AO75478 443 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 AP1G2O75843 785 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 LCP1P13796 627 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 MCM3P25205 808 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 ZNF143P52747 638 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-223ENST00000552480 TSPY1Q01534 308 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 MAPRE1Q15691 268 aaKnown RBP13.34□□□□□ -0.27
CACNB3-223ENST00000552480 PPP2R5EQ16537 467 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 AADACL2Q6P093 401 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 POLNQ7Z5Q5 900 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 PIGZQ86VD9 579 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 SLC13A5Q86YT5 568 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-223ENST00000552480 LRRC43Q8N309 656 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 MYLPFQ96A32 169 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 SMARCD1Q96GM5 515 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 PCED1BQ96HM7 432 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 RBM41Q96IZ5 413 aaKnown RBP13.34□□□□□ -0.27
CACNB3-223ENST00000552480 PIWIL1Q96J94 861 aaKnown RBP13.34□□□□□ -0.27
CACNB3-223ENST00000552480 PNKPQ96T60 521 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 KRT12Q99456 494 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 CNPY3Q9BT09 278 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 AP1M1Q9BXS5 423 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
CACNB3-223ENST00000552480 PRG3Q9Y2Y8 225 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-223ENST00000552480 FSCN2O14926 492 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 SYN3O14994 580 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 LRCH4O75427 683 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 TIMP1P01033 207 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 PDGFRAP16234 1089 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 DESP17661 470 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 GJC1P36383 396 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 CETN2P41208 172 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 SLC11A1P49279 550 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 MAP3K7CLP57077 242 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
CACNB3-223ENST00000552480 YWHAHQ04917 246 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-223ENST00000552480 BRD3Q15059 726 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 HADHQ16836 314 aaKnown RBP13.33□□□□□ -0.28
CACNB3-223ENST00000552480 EFHC1Q5JVL4 640 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 TRNP1Q6NT89 227 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 ARCQ7LC44 396 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 SCUBE3Q8IX30 993 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 KLHL7Q8IXQ5 586 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 RCOR2Q8IZ40 523 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 RXFP2Q8WXD0 754 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
CACNB3-223ENST00000552480 VWCEQ96DN2 955 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 SMOQ99835 787 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 LRRC1Q9BTT6 524 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 SLITRK6Q9H5Y7 841 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 MTUS1Q9ULD2 1270 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
CACNB3-223ENST00000552480 TTC3P53804 2025 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
CACNB3-223ENST00000552480 ABHD14A-ACY1A0A1B0GW23 586 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 GRAP2O75791 330 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 RNF8O76064 485 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 BEST1O76090 585 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 FBXO21O94952 628 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 OAZ2O95190 189 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 ZRANB2O95218 330 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNB3-223ENST00000552480 KRT1P04264 644 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 ALDH2P05091 517 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 KRT7P08729 469 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 TCF4P15884 667 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 PCK1P35558 622 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 FLT3P36888 993 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 PTPN9P43378 593 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 COPS2P61201 443 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 ADIGQ0VDE8 80 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 ELAVL2Q12926 359 aaKnown RBP13.32□□□□□ -0.28
CACNB3-223ENST00000552480 TAF5Q15542 800 aa13.32□□□□□ -0.28
CACNB3-223ENST00000552480 RAB41Q5JT25 222 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms