RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 KCNA1Q09470 495 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SOWAHAQ2M3V2 549 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SLC23A3Q6PIS1 610 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 ARMCX6Q7L4S7 300 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 FILIP1Q7Z7B0 1213 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 PIP4P1Q86T03 277 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SFR1Q86XK3 245 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SFTPA1Q8IWL2 248 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 KIAA1958Q8N8K9 716 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 IL17RCQ8NAC3 791 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 RASSF8Q8NHQ8 419 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SPACA7Q96KW9 195 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SPATA17Q96L03 361 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 PNKPQ96T60 521 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 TRPM5Q9NZQ8 1165 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 MAGEC2Q9UBF1 373 aaPredicted RBP18.09■□□□□ 0.49
CACNB3-222ENST00000552465 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
CACNB3-222ENST00000552465 NUP205Q92621 2012 aa18.08■□□□□ 0.49
CACNB3-222ENST00000552465 KIAA1549LQ6ZVL6 1849 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 A0A0A0MRY4 1105 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SPAARA0A1B0GVQ0 90 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 UPK3BL1B0FP48 263 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 UPK3BL2E5RIL1 263 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SGK1O00141 431 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 TIE1P35590 1138 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 LONP1P36776 959 aaKnown RBP18.08■□□□□ 0.48
CACNB3-222ENST00000552465 USP46P62068 366 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SLC7A9P82251 487 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 GRIN1Q05586 938 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 MESP2Q0VG99 397 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SEMA3BQ13214 749 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 DHCR24Q15392 516 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 MAP7D1Q3KQU3 841 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 HSF5Q4G112 596 aaPredicted RBP18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SPDYCQ5MJ68 293 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 EMC10Q5UCC4 262 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 LMBRD2Q68DH5 695 aaPredicted RBP18.08■□□□□ 0.48
CACNB3-222ENST00000552465 C4orf50Q6ZRC1 276 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SAAL1Q96ER3 474 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 FAM84AQ96KN4 292 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 CEP295NLQ96MC4 621 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 RNF38Q9H0F5 515 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 POLMQ9NP87 494 aaPredicted RBP18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SIX4Q9UIU6 781 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 KLK13Q9UKR3 277 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 LHX6Q9UPM6 363 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 EXOC7Q9UPT5 735 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 THADAQ6YHU6 1953 aa18.08■□□□□ 0.48
CACNB3-222ENST00000552465 SLC9A3R1O14745 358 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-222ENST00000552465 KAT7O95251 611 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 LDHAP00338 332 aaKnown RBP18.07■□□□□ 0.48
CACNB3-222ENST00000552465 KRT19P08727 400 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 LMO2P25791 158 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 GRIK1P39086 918 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 DPP6P42658 865 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 SIM1P81133 766 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-222ENST00000552465 BYSLQ13895 437 aaKnown RBP18.07■□□□□ 0.48
CACNB3-222ENST00000552465 EOGTQ5NDL2 527 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 LYSMD4Q5XG99 296 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 VSTM1Q6UX27 236 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 DENND5BQ6ZUT9 1274 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 DPH6Q7L8W6 267 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 DYMQ7RTS9 669 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 SYT15Q9BQS2 421 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 RBAKQ9NYW8 714 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-222ENST00000552465 BCCIPQ9P287 314 aaKnown RBP eCLIP18.07■□□□□ 0.48
CACNB3-222ENST00000552465 PILRBQ9UKJ0 227 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 TCHHQ07283 1943 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 MYO16Q9Y6X6 1858 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 IGF2RP11717 2491 aa18.07■□□□□ 0.48
CACNB3-222ENST00000552465 ZNF840PA6NDX5 716 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 H3BQV1 296 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 APODP05090 189 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 BDNFP23560 247 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 EIF2DP41214 584 aaKnown RBP18.06■□□□□ 0.48
CACNB3-222ENST00000552465 KIR2DL1P43626 348 aaPredicted RBP18.06■□□□□ 0.48
CACNB3-222ENST00000552465 PSMC1P62191 440 aaKnown RBP18.06■□□□□ 0.48
CACNB3-222ENST00000552465 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
CACNB3-222ENST00000552465 PEAR1Q5VY43 1037 aaPredicted RBP18.06■□□□□ 0.48
CACNB3-222ENST00000552465 RHBDF2Q6PJF5 856 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 LIMS2Q7Z4I7 341 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 C12orf40Q86WS4 652 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 HMGB4Q8WW32 186 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 MYLPFQ96A32 169 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 ACCSQ96QU6 501 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 TTLL2Q9BWV7 592 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 MRPL44Q9H9J2 332 aaKnown RBP18.06■□□□□ 0.48
CACNB3-222ENST00000552465 PDE11AQ9HCR9 933 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 CRTAC1Q9NQ79 661 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 CDH9Q9ULB4 789 aa18.06■□□□□ 0.48
CACNB3-222ENST00000552465 ATXN2Q99700 1313 aaKnown RBP18.05■□□□□ 0.48
CACNB3-222ENST00000552465 GOLGA8IPA6NC78 632 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 GOLGA8JA6NMD2 632 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 ADAM23O75077 832 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 OLFM2O95897 454 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 GARTP22102 1010 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 ITPKAP23677 461 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 ANXA13P27216 316 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms