RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PIGKQ92643 395 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 SYT15Q9BQS2 421 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 STRA6Q9BX79 667 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 NUSAP1Q9BXS6 441 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 STK17AQ9UEE5 414 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 EVLQ9UI08 416 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 CDH9Q9ULB4 789 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 PTPRDP23468 1912 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 PKD1L2Q7Z442 2459 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 PATE3B3GLJ2 98 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 LEFTY2O00292 366 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 CDX4O14627 284 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 GCNT3O95395 438 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 GRIK1P39086 918 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 PPP3CCP48454 512 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 WNT7BP56706 349 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 IRX4P78413 519 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 KCNA1Q09470 495 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 ALCAMQ13740 583 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 BYSLQ13895 437 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 SF3A1Q15459 793 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 CCDC142Q17RM4 750 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 SOWAHAQ2M3V2 549 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 HSF5Q4G112 596 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 TRIM61Q5EBN2 209 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 DENND5BQ6ZUT9 1274 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 FILIP1Q7Z7B0 1213 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 MYLPFQ96A32 169 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 ANKRD36BP1Q96IX9 119 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 TMX3Q96JJ7 454 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 MTMR12Q9C0I1 747 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 SLC32A1Q9H598 525 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 POLMQ9NP87 494 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 TBC1D7Q9P0N9 293 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 WASF3Q9UPY6 502 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 SMC3Q9UQE7 1217 aa15.17■□□□□ 0.02
CHMP1A-210ENST00000551981 TNRC6BQ9UPQ9 1833 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 GOLGA8IPA6NC78 632 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 GOLGA8JA6NMD2 632 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 TRIM66O15016 1216 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 HCRTO43612 131 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 TNNC2P02585 160 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 APODP05090 189 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 CYP17A1P05093 508 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 SPINK2P20155 84 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 TXLNAP40222 546 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 PSMC1P62191 440 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 SLC7A9P82251 487 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 CYP27A1Q02318 531 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 EOGTQ5NDL2 527 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 LARP1BQ659C4 914 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 SV2BQ7L1I2 683 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 ZSWIM2Q8NEG5 633 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 DEFB124Q8NES8 71 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 HPDLQ96IR7 371 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 EPSTI1Q96J88 318 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 PNKPQ96T60 521 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 SCNM1Q9BWG6 230 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 OLFML3Q9NRN5 406 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 SIX4Q9UIU6 781 aa15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 DSPP15924 2871 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 ASCC3Q8N3C0 2202 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-210ENST00000551981 PLXND1Q9Y4D7 1925 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 ANKRD11Q6UB99 2663 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 ATP2C2O75185 946 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 KAT7O95251 611 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 KLF8O95600 359 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 ADH1CP00326 375 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 BDNFP23560 247 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 EIF2DP41214 584 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 P2RY2P41231 377 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 RESTQ13127 1097 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 DHCR24Q15392 516 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 SPDYCQ5MJ68 293 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 RRAGBQ5VZM2 374 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 ERICH6BQ5W0A0 696 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 DDX42Q86XP3 938 aaKnown RBP eCLIP15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 SYT12Q8IV01 421 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 ADGRG2Q8IZP9 1017 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 TXNDC5Q8NBS9 432 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 CBWD1Q9BRT8 395 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 TTLL2Q9BWV7 592 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 CPQQ9Y646 472 aa15.15■□□□□ 0.02
CHMP1A-210ENST00000551981 PI4KAP42356 2102 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ZNF840PA6NDX5 716 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 KIAA0391O15091 583 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ABL1P00519 1130 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 IDEP14735 1019 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 LMO2P25791 158 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms