RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 KIF9Q9HAQ2 790 aa10.38□□□□□ -0.75
GCN1-208ENST00000551549 MAPK8IP1Q9UQF2 711 aa10.38□□□□□ -0.75
GCN1-208ENST00000551549 A0A1W2PQ27 194 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 A0A1W2PQ64 194 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 A0A1W2PQD8 194 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 F8VP50 259 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 TRIM66O15016 1216 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 CLSTN1O94985 981 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 CKMP06732 381 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 HDCP19113 662 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 ANXA13P27216 316 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 AP3M2P53677 418 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 MTF1Q14872 753 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 PDGFRLQ15198 375 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 CEP135Q66GS9 1140 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 CC2D1AQ6P1N0 951 aaPredicted RBP10.37□□□□□ -0.75
GCN1-208ENST00000551549 KRBA2Q6ZNG9 492 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 DENND5BQ6ZUT9 1274 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 SH3RF2Q8TEC5 729 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 TTLL2Q9BWV7 592 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 FAM126AQ9BYI3 521 aaPredicted RBP10.37□□□□□ -0.75
GCN1-208ENST00000551549 SCAND2PQ9GZW5 306 aaPredicted RBP10.37□□□□□ -0.75
GCN1-208ENST00000551549 EPC1Q9H2F5 836 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 LINC00597Q9H2U6 94 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 VRTNQ9H8Y1 702 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 FBRSL1Q9HCM7 1045 aaKnown RBP10.37□□□□□ -0.75
GCN1-208ENST00000551549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
GCN1-208ENST00000551549 TRPM5Q9NZQ8 1165 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 SMG5Q9UPR3 1016 aaKnown RBP10.37□□□□□ -0.75
GCN1-208ENST00000551549 WNT6Q9Y6F9 365 aa10.37□□□□□ -0.75
GCN1-208ENST00000551549 SDK1Q7Z5N4 2213 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ZNF840PA6NDX5 716 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 CHURC1-FNTBB4DL54 471 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 K7ESF4 209 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 CALUO43852 315 aaPredicted RBP10.36□□□□□ -0.75
GCN1-208ENST00000551549 AKAP3O75969 853 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 RHOBTB3O94955 611 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ZNF202O95125 648 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 EGFP01133 1207 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 FNTBP49356 437 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 GALK1P51570 392 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 NRLP54845 237 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 NOP14P78316 857 aaKnown RBP10.36□□□□□ -0.75
GCN1-208ENST00000551549 ZXDBP98169 803 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 GRSF1Q12849 480 aaKnown RBP eCLIP10.36□□□□□ -0.75
GCN1-208ENST00000551549 TAF10Q12962 218 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 USP4Q13107 963 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ORC1Q13415 861 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 KCNB1Q14721 858 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 PPP2R5DQ14738 602 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ZACNQ401N2 412 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ZNF667Q5HYK9 610 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 TMEM196Q5HYL7 178 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 SPOPLQ6IQ16 392 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 PKN3Q6P5Z2 889 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 PAQR9Q6ZVX9 377 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 SV2AQ7L0J3 742 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 OSCP1Q8WVF1 389 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 CEP295NLQ96MC4 621 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 MED10Q9BTT4 135 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ELOVL4Q9GZR5 314 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 RNF38Q9H0F5 515 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ECT2Q9H8V3 914 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 POLR3BQ9NW08 1133 aaPredicted RBP10.36□□□□□ -0.75
GCN1-208ENST00000551549 DUS2Q9NX74 493 aaKnown RBP10.36□□□□□ -0.75
GCN1-208ENST00000551549 ARHGAP26Q9UNA1 814 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 TRAF3IP3Q9Y228 551 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 FRMD4BQ9Y2L6 1034 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 ATP6V1DQ9Y5K8 247 aa10.36□□□□□ -0.75
GCN1-208ENST00000551549 NUP210Q8TEM1 1887 aaPredicted RBP10.36□□□□□ -0.75
GCN1-208ENST00000551549 PATJQ8NI35 1801 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 FANCMQ8IYD8 2048 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 LEFTY2O00292 366 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 TRDMT1O14717 391 aaKnown RBP10.35□□□□□ -0.75
GCN1-208ENST00000551549 PAPSS2O95340 614 aaPredicted RBP10.35□□□□□ -0.75
GCN1-208ENST00000551549 ABL1P00519 1130 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 HLA-DRAP01903 254 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 NR2F2P24468 414 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 GJA4P35212 333 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 ID4P47928 161 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 IFNAR2P48551 515 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 VAMP7P51809 220 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 SRSF5Q13243 272 aaKnown RBP10.35□□□□□ -0.75
GCN1-208ENST00000551549 LPAL2Q16609 132 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 EML3Q32P44 896 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 HEATR6Q6AI08 1181 aaKnown RBP10.35□□□□□ -0.75
GCN1-208ENST00000551549 ACOT1Q86TX2 421 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
GCN1-208ENST00000551549 SYNPOQ8N3V7 929 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 CPA6Q8N4T0 437 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 SCAMP5Q8TAC9 235 aa10.35□□□□□ -0.75
GCN1-208ENST00000551549 CCDC47Q96A33 483 aaKnown RBP10.35□□□□□ -0.75
GCN1-208ENST00000551549 KCNK16Q96T55 309 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms