RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SAFBQ15424 915 aaKnown RBP eCLIP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SLC35G1Q2M3R5 365 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 CERKLQ49MI3 558 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SBK1Q52WX2 424 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 COBLL1Q53SF7 1204 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SYCP2LQ5T4T6 812 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 THEMIS2Q5TEJ8 643 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 KRT40Q6A162 431 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 NAA16Q6N069 864 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 CNKSR3Q6P9H4 555 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 B3GNT9Q6UX72 402 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ATF7IPQ6VMQ6 1270 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SRGAP1Q7Z6B7 1085 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 TTC7BQ86TV6 843 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 DZIP1Q86YF9 867 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 DRC7Q8IY82 874 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 LCORLQ8N3X6 602 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 MB21D1Q8N884 522 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 MIGA1Q8NAN2 632 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 PJA1Q8NG27 643 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 PPP1R14CQ8TAE6 165 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 TIFAQ96CG3 184 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SIGLEC10Q96LC7 697 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 FAM193BQ96PV7 902 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 TAAR9Q96RI9 348 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 STRBPQ96SI9 672 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ACO2Q99798 780 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SARGQ9BW04 601 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 API5Q9BZZ5 524 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 HAPLN2Q9GZV7 340 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 MROH8Q9H579 483 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 AS3MTQ9HBK9 375 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SLC38A10Q9HBR0 1119 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 EPB41L4AQ9HCS5 686 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 KMT5AQ9NQR1 393 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 IL17RBQ9NRM6 502 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ZBTB40Q9NUA8 1239 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 GNL3LQ9NVN8 582 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 HOXC10Q9NYD6 342 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 NYAP2Q9P242 653 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 USP25Q9UHP3 1055 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 LIMCH1Q9UPQ0 1083 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 VWA7Q9Y334 891 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ZZEF1O43149 2961 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SMCHD1A6NHR9 2005 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 GREB1LQ9C091 1923 aaPredicted RBP2.78□□□□□ -1.97
CPSF6-207ENST00000551516 TECTAO75443 2155 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PLIN4Q96Q06 1357 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 COL4A6Q14031 1691 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 A0A0A6YYK5 440 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 H3BML4 177 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 RFXAPO00287 272 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 WDR46O15213 610 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SLC16A6O15403 523 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 B4GALT4O60513 344 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PLA2G6O60733 806 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PRAMEF4O60810 478 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TUSC2O75896 110 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 UBXN7O94888 489 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 LY86O95711 162 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 NDUFB10O96000 172 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CXCL10P02778 98 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CYP1A1P04798 512 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ASGR1P07306 291 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 GNAI3P08754 354 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 IFIT2P09913 472 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 EEF2P13639 858 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FOSL2P15408 326 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CTSSP25774 331 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 RPL13P26373 211 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ADSLP30566 484 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CYP2C18P33260 490 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ADD2P35612 726 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 USP14P54578 494 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 MLLT6P55198 1093 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 GSTO1P78417 241 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ADAM17P78536 824 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 GHRHRQ02643 423 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TAP1Q03518 808 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FPGSQ05932 587 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TOP3AQ13472 1001 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CAMK1Q14012 370 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 RTP5Q14D33 572 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 LLGL1Q15334 1064 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 UBE3CQ15386 1083 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 C19orf54Q5BKX5 351 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PRR31Q5SQ13 230 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 MFSD14CQ5VZR4 134 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CCDC149Q6ZUS6 474 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM179Q6ZVK1 233 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 RASGRP2Q7LDG7 609 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CHST15Q7LFX5 561 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TAS1R1Q7RTX1 841 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 C11orf96Q7Z7L8 435 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FAM129CQ86XR2 697 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 DENND1CQ8IV53 801 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 RHOT1Q8IXI2 618 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms