RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 BRAFP15056 766 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 VAMP1P23763 118 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 IVDP26440 423 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 CHRNA3P32297 505 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 MTIF2P46199 727 aaKnown RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 HSD17B4P51659 736 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 POLR2FP61218 127 aaKnown RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 HAND2P61296 217 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 TUBA4AP68366 448 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 IL9RQ01113 521 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 DR1Q01658 176 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 LRRC63Q05C16 580 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SF3A3Q12874 501 aaKnown RBP eCLIP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 RAPGEF1Q13905 1077 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 E2F2Q14209 437 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 MBTPS1Q14703 1052 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 LRRC14Q15048 493 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PDK3Q15120 406 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SIX1Q15475 284 aaPredicted RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 CNGA3Q16281 694 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PHKG1Q16816 387 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PLA2G4EQ3MJ16 856 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 TAF1BQ53T94 588 aaPredicted RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 HERC4Q5GLZ8 1057 aaPredicted RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM83BQ5T0W9 1011 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 FYB2Q5VWT5 728 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 METTL21CQ5VZV1 264 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SPOPLQ6IQ16 392 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 NIPAL1Q6NVV3 410 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PGM2L1Q6PCE3 622 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 TPTE2Q6XPS3 522 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 Q6ZS46 218 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 CATIPQ7Z7H3 387 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PHLDB2Q86SQ0 1253 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PDZD3Q86UT5 571 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 ZDHHC14Q8IZN3 488 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 ARHGAP24Q8N264 748 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PRELID2Q8N945 189 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 OR6Y1Q8NGX8 325 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC30A5Q8TAD4 765 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 STK35Q8TDR2 534 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 GIPC3Q8TF64 312 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 DYDC2Q96IM9 177 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF512BQ96KM6 892 aaPredicted RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 NSMCE3Q96MG7 304 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF641Q96N77 438 aaPredicted RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 RANBP9Q96S59 729 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SYT11Q9BT88 431 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 OSBPL10Q9BXB5 764 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PSTPIP2Q9H939 334 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 TRPC7Q9HCX4 862 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 S100A14Q9HCY8 104 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 ERVK-5Q9HDB9 667 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 DISC1Q9NRI5 854 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 TCP11L1Q9NUJ3 509 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC38A7Q9NVC3 462 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 WHRNQ9P202 907 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 THEGQ9P2T0 379 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 VTI1BQ9UEU0 232 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 GPN3Q9UHW5 284 aaPredicted RBP5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 PHTF1Q9UMS5 762 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 B3GNT3Q9Y2A9 372 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 CARD8Q9Y2G2 431 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 SNX24Q9Y343 169 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF711Q9Y462 761 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 N6AMT1Q9Y5N5 214 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 MYH10P35580 1976 aa5.56□□□□□ -1.52
LSM3P2-201ENST00000551246 FLT1P17948 1338 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PCDH11YQ9BZA8 1340 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PVALEFA0A1B0GWK0 134 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD34BA5PLL1 514 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TRIM64A6NGJ6 449 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM47DPA6NHR8 397 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 C1QTNF9BB2RNN3 333 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 C9orf172C9J069 976 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 F8W735 103 aaPredicted RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 AQP9O43315 295 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TYROBPO43914 113 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 CCNT2O60583 730 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 DNAJA2O60884 412 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 SULT1C4O75897 302 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM155BO75949 473 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TM7SF2O76062 418 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TTC4O95801 387 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ANXA1P04083 346 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 FGFR1P11362 822 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 CETPP11597 493 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 GNAT2P19087 354 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 TKTP29401 623 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PRDX6P30041 224 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 STX2P32856 288 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 KRT2P35908 639 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 IGHMBP2P38935 993 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 IL15P40933 162 aaPredicted RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ACADSBP45954 432 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ARL4DP49703 201 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 ST13P50502 369 aaKnown RBP5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 CCR3P51677 355 aa5.55□□□□□ -1.52
LSM3P2-201ENST00000551246 PLTPP55058 493 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms