RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 FAM200BP0CF97 657 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 NPR3P17342 541 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 TBXAS1P24557 533 aaPredicted RBP14.14□□□□□ -0.15
CEP290-205ENST00000550962 YWHAQP27348 245 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 KPNA1P52294 538 aaPredicted RBP14.14□□□□□ -0.15
CEP290-205ENST00000550962 PMS1P54277 932 aaKnown RBP14.14□□□□□ -0.15
CEP290-205ENST00000550962 SLC8A3P57103 927 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 AMPD2Q01433 879 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 CAMK4Q16566 473 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 CCDC142Q17RM4 750 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 TTI2Q6NXR4 508 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 NUP93Q8N1F7 819 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 OVCA2Q8WZ82 227 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 TTLL2Q9BWV7 592 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 SLC46A2Q9BY10 475 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 SDCBP2Q9H190 292 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 C8orf33Q9H7E9 229 aaPredicted RBP14.14□□□□□ -0.15
CEP290-205ENST00000550962 KRT82Q9NSB4 513 aa14.14□□□□□ -0.15
CEP290-205ENST00000550962 PPP1R3GB7ZBB8 358 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
CEP290-205ENST00000550962 CD58P19256 250 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
CEP290-205ENST00000550962 TXNDC8Q6A555 127 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 TMEM150AQ86TG1 271 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 CCDC105Q8IYK2 499 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 MLKLQ8NB16 471 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 DTWD2Q8NBA8 298 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 SLC2A14Q8TDB8 520 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 SLC35C1Q96A29 364 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 DDX23Q9BUQ8 820 aaKnown RBP14.13□□□□□ -0.15
CEP290-205ENST00000550962 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 CLSTN2Q9H4D0 955 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 FBXO44Q9H4M3 255 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.15
CEP290-205ENST00000550962 HEBP1Q9NRV9 189 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 RWDD2AQ9UIY3 292 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 COQ4Q9Y3A0 265 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 PIAS3Q9Y6X2 628 aa14.13□□□□□ -0.15
CEP290-205ENST00000550962 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
CEP290-205ENST00000550962 CLDN5O00501 218 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 NRG2O14511 850 aaPredicted RBP14.12□□□□□ -0.15
CEP290-205ENST00000550962 PMM2O15305 246 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 CILPO75339 1184 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 PRAMEF12O95522 483 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 ABL1P00519 1130 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 HDCP19113 662 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 FMO5P49326 533 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 IFRD2Q12894 506 aaPredicted RBP14.12□□□□□ -0.15
CEP290-205ENST00000550962 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 IER5LQ5T953 404 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CEP290-205ENST00000550962 FUKQ8N0W3 1084 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 FBXO32Q969P5 355 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 CYFIP2Q96F07 1278 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 NT5C1BQ96P26 610 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 IPO9Q96P70 1041 aaKnown RBP14.12□□□□□ -0.15
CEP290-205ENST00000550962 HNRNPABQ99729 332 aaKnown RBP14.12□□□□□ -0.15
CEP290-205ENST00000550962 IER2Q9BTL4 223 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 APOBEC3GQ9HC16 384 aaKnown RBP14.12□□□□□ -0.15
CEP290-205ENST00000550962 PNPLA8Q9NP80 782 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 LTB4R2Q9NPC1 389 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 FAM49BQ9NUQ9 324 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 NME7Q9Y5B8 376 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.12□□□□□ -0.15
CEP290-205ENST00000550962 KMT2EQ8IZD2 1858 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 NCANO14594 1321 aa14.12□□□□□ -0.15
CEP290-205ENST00000550962 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 TADA3O75528 432 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 CCDC130P13994 396 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 BMP6P22004 513 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 ADORA2BP29275 332 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 SLC5A3P53794 718 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 MARSP56192 900 aaKnown RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 STX17P56962 302 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 TAF10Q12962 218 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 CUL2Q13617 745 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 LRRC32Q14392 662 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 PPP2R5DQ14738 602 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 ITPRIPL2Q3MIP1 535 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 CBWD6Q4V339 395 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 CBWD3Q5JTY5 395 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 CBWD5Q5RIA9 395 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 RALGPS2Q86X27 583 aaPredicted RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 FAM114A1Q8IWE2 563 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 KIAA1958Q8N8K9 716 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 FAM3CQ92520 227 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 ATOH1Q92858 354 aaPredicted RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 USP13Q92995 863 aaPredicted RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 ELMO3Q96BJ8 720 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 TMEM176AQ96HP8 235 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 HEXIM2Q96MH2 286 aaKnown RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 DUSP9Q99956 384 aaKnown RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 SRRTQ9BXP5 876 aaKnown RBP14.11□□□□□ -0.15
CEP290-205ENST00000550962 FOXQ1Q9C009 403 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 CISHQ9NSE2 258 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 ARHGAP26Q9UNA1 814 aa14.11□□□□□ -0.15
CEP290-205ENST00000550962 ZNF840PA6NDX5 716 aa14.1□□□□□ -0.15
CEP290-205ENST00000550962 AFPP02771 609 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms