RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 FGL2Q14314 439 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 RGS7BPQ6MZT1 257 aaPredicted RBP5.25□□□□□ -1.57
CCDC38-208ENST00000549876 TRIM72Q6ZMU5 477 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 ZNF280BQ86YH2 543 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 SPATA3Q8NHX4 192 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 RP9Q8TA86 221 aaKnown RBP5.25□□□□□ -1.57
CCDC38-208ENST00000549876 GLG1Q92896 1179 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 P2RX7Q99572 595 aaKnown RBP5.25□□□□□ -1.57
CCDC38-208ENST00000549876 DDX56Q9NY93 547 aaKnown RBP5.25□□□□□ -1.57
CCDC38-208ENST00000549876 MRPS17Q9Y2R5 130 aaKnown RBP5.25□□□□□ -1.57
CCDC38-208ENST00000549876 A1L4Q6 167 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 H3BML4 177 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 H7C1Q1 480 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 SOCS2O14508 198 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 AKAP10O43572 662 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 UBXN7O94888 489 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 TJP3O95049 919 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 CSF1RP07333 972 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 CCKARP32238 428 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 RAB27AP51159 221 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 ARFIP2P53365 341 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 E2F2Q14209 437 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 ZIK1Q3SY52 487 aaPredicted RBP5.24□□□□□ -1.57
CCDC38-208ENST00000549876 PARS2Q7L3T8 475 aaKnown RBP5.24□□□□□ -1.57
CCDC38-208ENST00000549876 TPH2Q8IWU9 490 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 SLC35G2Q8TBE7 412 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 PIGOQ8TEQ8 1089 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 JPH3Q8WXH2 748 aaPredicted RBP5.24□□□□□ -1.57
CCDC38-208ENST00000549876 MTFMTQ96DP5 389 aaKnown RBP5.24□□□□□ -1.57
CCDC38-208ENST00000549876 AIFM3Q96NN9 605 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 NT5C1BQ96P26 610 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 MOGAT1Q96PD6 335 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 MESP1Q9BRJ9 268 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 THAP7Q9BT49 309 aaPredicted RBP5.24□□□□□ -1.57
CCDC38-208ENST00000549876 TMX2Q9Y320 296 aa5.24□□□□□ -1.57
CCDC38-208ENST00000549876 THP07101 528 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 NPSP0C0P6 89 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
CCDC38-208ENST00000549876 NPR1P16066 1061 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 HTR1BP28222 390 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 MYO1EQ12965 1108 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 FCRL6Q6DN72 434 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 MIS18BP1Q6P0N0 1132 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 IRF2BP2Q7Z5L9 587 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 COL23A1Q86Y22 540 aaPredicted RBP5.23□□□□□ -1.57
CCDC38-208ENST00000549876 DENND1CQ8IV53 801 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 LRRC71Q8N4P6 559 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 NRACQ8N912 160 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 PRSS3P2Q8NHM4 247 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 PPP1R35Q8TAP8 253 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 COQ8BQ96D53 544 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 ACO2Q99798 780 aaKnown RBP5.23□□□□□ -1.57
CCDC38-208ENST00000549876 GLOD4Q9HC38 313 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 PIH1D1Q9NWS0 290 aaKnown RBP5.23□□□□□ -1.57
CCDC38-208ENST00000549876 TRNAU1APQ9NX07 287 aaKnown RBP5.23□□□□□ -1.57
CCDC38-208ENST00000549876 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 SHOC2Q9UQ13 582 aa5.23□□□□□ -1.57
CCDC38-208ENST00000549876 hCG_2014768A0A024R1R8 64 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 E2F8A0AVK6 867 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 MYMKA6NI61 221 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 POC1B-GALNT4F8VUJ3 575 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 ATP5F1P24539 256 aaPredicted RBP5.22□□□□□ -1.57
CCDC38-208ENST00000549876 LRPAP1P30533 357 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 PDE1AP54750 535 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 GTF2H3Q13889 308 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 LRRC41Q15345 812 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 Q6ZWC4 215 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 EPM2AIP1Q7L775 607 aaPredicted RBP5.22□□□□□ -1.57
CCDC38-208ENST00000549876 GALNT4Q8N4A0 578 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 NANOGP1Q8N7R0 232 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 DNAJC5GQ8N7S2 189 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 R3HDM4Q96D70 268 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 DAZAP1Q96EP5 407 aaKnown RBP5.22□□□□□ -1.57
CCDC38-208ENST00000549876 TAAR9Q96RI9 348 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 TRIM54Q9BYV2 358 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 CXorf36Q9H7Y0 433 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 NMRK2Q9NPI5 230 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 CNNM1Q9NRU3 951 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 KLHL13Q9P2N7 655 aa5.22□□□□□ -1.57
CCDC38-208ENST00000549876 A0A087WWL8 130 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 FCHO1O14526 889 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 RFPL1O75677 317 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 FGBP02675 491 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 CYP2A6P11509 494 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-208ENST00000549876 CYP2C9P11712 490 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 HSPA6P17066 643 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 ADORA2AP29274 412 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 DGKEP52429 567 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 WNT3P56703 355 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 ANAPC15P60006 121 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 CTBP1Q13363 440 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 TWIST1Q15672 202 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 MIDNQ504T8 468 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 KIRREL2Q6UWL6 708 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 MRPL10Q7Z7H8 261 aaKnown RBP5.21□□□□□ -1.58
CCDC38-208ENST00000549876 SLC15A4Q8N697 577 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 C16orf52Q8NHV5 167 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 ADAMTS15Q8TE58 950 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 SOCS4Q8WXH5 440 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 VCPIP1Q96JH7 1222 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms