RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SPATA32Q96LK8 384 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 HINFPQ9BQA5 517 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 SNX25Q9H3E2 840 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 FBRSL1Q9HCM7 1045 aaKnown RBP14.33□□□□□ -0.12
GCN1-206ENST00000549815 TRPC7Q9HCX4 862 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 F8VP50 259 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 PDXKO00764 312 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 TRIM66O15016 1216 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 HRO43593 1189 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 OLFM2O95897 454 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 CKMP06732 381 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 PRR29P0C7W0 189 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 PFKLP17858 780 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 HOXA6P31267 233 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 GJA4P35212 333 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 NDUFA8P51970 172 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 AP3M2P53677 418 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 NOP14P78316 857 aaKnown RBP14.32□□□□□ -0.12
GCN1-206ENST00000549815 KRT85P78386 507 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 NAIF1Q69YI7 327 aaPredicted RBP14.32□□□□□ -0.12
GCN1-206ENST00000549815 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 B3GNT5Q9BYG0 378 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 ZNF518BQ9C0D4 1074 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 SMYD3Q9H7B4 428 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 ECT2Q9H8V3 914 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 NCDNQ9UBB6 729 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 NXF1Q9UBU9 619 aaKnown RBP14.32□□□□□ -0.12
GCN1-206ENST00000549815 ARHGAP26Q9UNA1 814 aa14.32□□□□□ -0.12
GCN1-206ENST00000549815 KIAA1549LQ6ZVL6 1849 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 MYO16Q9Y6X6 1858 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 ZNF840PA6NDX5 716 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 A8MXQ7 604 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 CHURC1-FNTBB4DL54 471 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 CLDN5O00501 218 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 NR3C1P04150 777 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 HDCP19113 662 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 ANXA13P27216 316 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 FNTBP49356 437 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 GALK1P51570 392 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 CDH8P55286 799 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 EML3Q32P44 896 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 ZACNQ401N2 412 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 C1orf220Q5T0J3 134 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 CC2D1AQ6P1N0 951 aaPredicted RBP14.31□□□□□ -0.12
GCN1-206ENST00000549815 PAQR9Q6ZVX9 377 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 LONP2Q86WA8 852 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 B3GALNT2Q8NCR0 500 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 SH3RF2Q8TEC5 729 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 EZH1Q92800 747 aaPredicted RBP14.31□□□□□ -0.12
GCN1-206ENST00000549815 ELMO3Q96BJ8 720 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 ELOVL4Q9GZR5 314 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 DUS2Q9NX74 493 aaKnown RBP14.31□□□□□ -0.12
GCN1-206ENST00000549815 TRAF3IP3Q9Y228 551 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 WNT6Q9Y6F9 365 aa14.31□□□□□ -0.12
GCN1-206ENST00000549815 ATG2BQ96BY7 2078 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 A0A1W2PQ27 194 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 A0A1W2PQ64 194 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 A0A1W2PQD8 194 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 PHACTR2O75167 634 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 EGFP01133 1207 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
GCN1-206ENST00000549815 SYKP43405 635 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 RAP1GAPP47736 663 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 SLC7A9P82251 487 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 FOXK2Q01167 660 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 GRSF1Q12849 480 aaKnown RBP eCLIP14.3□□□□□ -0.12
GCN1-206ENST00000549815 DPYDQ12882 1025 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 SRSF5Q13243 272 aaKnown RBP14.3□□□□□ -0.12
GCN1-206ENST00000549815 BIRC3Q13489 604 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 NCOA4Q13772 614 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 KCNB1Q14721 858 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 ZNF699Q32M78 642 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 ZNF667Q5HYK9 610 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 ERMP1Q7Z2K6 904 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 TMC2Q8TDI7 906 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 RNF38Q9H0F5 515 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 GOLPH3LQ9H4A5 285 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 PARD6AQ9NPB6 346 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 DLL3Q9NYJ7 618 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 EHD2Q9NZN4 543 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 TRPM5Q9NZQ8 1165 aa14.3□□□□□ -0.12
GCN1-206ENST00000549815 TNFRSF10BO14763 440 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 OAS1P00973 400 aaKnown RBP14.29□□□□□ -0.12
GCN1-206ENST00000549815 DRD1P21728 446 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 CNR2P34972 360 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 PPP3CCP48454 512 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 IFNAR2P48551 515 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 PDE6CP51160 858 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 MCCD1P59942 119 aaPredicted RBP14.29□□□□□ -0.12
GCN1-206ENST00000549815 AMPD2Q01433 879 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 TAF10Q12962 218 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 NFIL3Q16649 462 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 KRBA2Q6ZNG9 492 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 SV2AQ7L0J3 742 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 FAM35AQ86V20 835 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 WDR5BQ86VZ2 330 aa14.29□□□□□ -0.12
GCN1-206ENST00000549815 CPA6Q8N4T0 437 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms