RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 PDCD2LQ9BRP1 358 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 CHMP4AQ9BY43 222 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 B3GNT5Q9BYG0 378 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 NUP62CLQ9H1M0 184 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 LY9Q9HBG7 655 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 ING3Q9NXR8 418 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 NTMQ9P121 344 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 SRP68Q9UHB9 627 aaKnown RBP2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 FAM184BQ9ULE4 1060 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 NAP1L2Q9ULW6 460 aaPredicted RBP2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 HPSEQ9Y251 543 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 VWA7Q9Y334 891 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 CTDP1Q9Y5B0 961 aaPredicted RBP2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 V9GYY5 206 aaPredicted RBP2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 ABCC12Q96J65 1359 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 CHD4Q14839 1912 aa2.7□□□□□ -1.98
DEPDC4-206ENST00000549100 PLCH1Q4KWH8 1693 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TNRC6CQ9HCJ0 1690 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 CDHR2Q9BYE9 1310 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PCDH11XQ9BZA7 1347 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PCDH11YQ9BZA8 1340 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 DLEC1Q9Y238 1755 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 COL5A3P25940 1745 aaPredicted RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TIAM2Q8IVF5 1701 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 FAM171A2A8MVW0 826 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 BTBD18B2RXH4 712 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 HIP1O00291 1037 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ALDH1A2O94788 518 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TOX4O94842 621 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 MBD4O95243 580 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PDE8BO95263 885 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PLEKHA8P1O95397 391 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ZBED1O96006 694 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 AMY1AP04745 511 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 CYP1A1P04798 512 aaPredicted RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TPM2P07951 284 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PFKFB1P16118 471 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ZKSCAN1P17029 563 aaPredicted RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 U2AF2P26368 475 aaKnown RBP eCLIP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 HTR1BP28222 390 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ECHS1P30084 290 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SREBF1P36956 1147 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 CRKLP46109 303 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SARSP49591 514 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 MEOX1P50221 254 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 NEK3P51956 506 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 GJA9P57773 515 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ADAM8P78325 824 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 CBX1P83916 185 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 HGFACQ04756 655 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 CHRNDQ07001 517 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 DPTQ07507 201 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 R3HDM1Q15032 1099 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SAFBQ15424 915 aaKnown RBP eCLIP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 MAN2A1Q16706 1144 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 KCTD19Q17RG1 926 aaPredicted RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SLC4A8Q2Y0W8 1093 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 COBLL1Q53SF7 1204 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 HSP90AA4PQ58FG1 418 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 C19orf54Q5BKX5 351 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 METTL24Q5JXM2 366 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SLC9C2Q5TAH2 1124 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 AGBL4Q5VU57 503 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ANO1Q5XXA6 986 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TBC1D9BQ66K14 1250 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 IL31Q6EBC2 164 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 NAA16Q6N069 864 aaPredicted RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PPP4R4Q6NUP7 873 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 NPNTQ6UXI9 565 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 LDHAL6AQ6ZMR3 332 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 APTXQ7Z2E3 356 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TMEM139Q8IV31 216 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 REXO1L1PQ8IX06 675 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 KIAA0319LQ8IZA0 1049 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 AOPEPQ8N6M6 819 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TXNDC5Q8NBS9 432 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PLA2G15Q8NCC3 412 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 REPS2Q8NFH8 660 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 MYRIPQ8NFW9 859 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 FBXO18Q8NFZ0 1043 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 OR14K1Q8NGZ2 314 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SVIPQ8NHG7 77 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ADAMTS17Q8TE56 1095 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 NSUN6Q8TEA1 469 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 SDR42E1Q8WUS8 393 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ZNF480Q8WV37 535 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ANKRD7Q92527 254 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 STAMQ92783 540 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 GFM2Q969S9 779 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 RGMAQ96B86 450 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 PAWRQ96IZ0 340 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 MRGPRX4Q96LA9 322 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 NT5C1BQ96P26 610 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 RIOK1Q9BRS2 568 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 ZNF341Q9BYN7 854 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 XPO4Q9C0E2 1151 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TMEM168Q9H0V1 697 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TMEM60Q9H2L4 133 aa2.69□□□□□ -1.98
DEPDC4-206ENST00000549100 TNMDQ9H2S6 317 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms