RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 TRIM39Q9HCM9 518 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SIX2Q9NPC8 291 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 NLRC4Q9NPP4 1024 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 GDF3Q9NR23 364 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CYP26B1Q9NR63 512 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 FAM114A2Q9NRY5 505 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ADARB2Q9NS39 739 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 HOMER3Q9NSC5 361 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 C1orf112Q9NSG2 853 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 GPRC5DQ9NZD1 345 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 HSPBP1Q9NZL4 362 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 RGL1Q9NZL6 768 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SAMD15Q9P1V8 674 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 CALCOCO1Q9P1Z2 691 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 WHRNQ9P202 907 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 COL20A1Q9P218 1284 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 ARHGAP28Q9P2N2 729 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SLC9A2Q9UBY0 812 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.78□□□□□ -2.12
LGR5-205ENST00000549015 PUF60Q9UHX1 559 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 FEZ2Q9UHY8 353 aaPredicted RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 HACL1Q9UJ83 578 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 RASAL2Q9UJF2 1139 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 AMFRQ9UKV5 643 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 TBX20Q9UMR3 447 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SLC45A1Q9Y2W3 748 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.78□□□□□ -2.12
LGR5-205ENST00000549015 NOC2LQ9Y3T9 749 aaKnown RBP1.78□□□□□ -2.12
LGR5-205ENST00000549015 ZNF451Q9Y4E5 1061 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 TRAF6Q9Y4K3 522 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PCDHAC2Q9Y5I4 1007 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 SCINQ9Y6U3 715 aa1.78□□□□□ -2.12
LGR5-205ENST00000549015 PHIPQ8WWQ0 1821 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ZNF236Q9UL36 1845 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ADGRA2Q96PE1 1338 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 PASKQ96RG2 1323 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 IGKV6-21A0A0C4DH24 114 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 NPHP3-ACAD11A0A0J9YXS1 232 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 LOC100289279A0A1B0GTE1 492 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 TCRBV16S1A1N1A0A5B0 115 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 CCDC189A1A4V9 331 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 DENND3A2RUS2 1198 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ZNF233A6NK53 670 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ASB14A6NK59 587 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ZNF891A8MT65 544 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 RSPH10B2B2RC85 870 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 M0R082 166 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 DDX3XO00571 662 aaKnown RBP eCLIP1.77□□□□□ -2.13
LGR5-205ENST00000549015 KCNK3O14649 394 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 GABRDO14764 452 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 NKRFO15226 690 aaKnown RBP eCLIP1.77□□□□□ -2.13
LGR5-205ENST00000549015 ASAP2O43150 1006 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 PSTPIP1O43586 416 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 GFRA3O60609 400 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 SHOX2O60902 331 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 HSF2BPO75031 334 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 PHF2O75151 1096 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 RTN2O75298 545 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 MAFO75444 373 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 TOM1L1O75674 476 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 PALMO75781 387 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 FARP2O94887 1054 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 FBXO21O94952 628 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 HEXIM1O94992 359 aaKnown RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 IL18RAPO95256 599 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 MOCS3O95396 460 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 DLGAP3O95886 979 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 GAS8O95995 478 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 CCNE2O96020 404 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 MT-CO1P00395 513 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ASS1P00966 412 aaKnown RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 ALBP02768 609 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 CYP1A2P05177 515 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 CALB1P05937 261 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ADRB2P07550 413 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 PLEKP08567 350 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 PAEPP09466 180 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 NUDT17P0C025 328 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 WEE2P0C1S8 567 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 C6orf222P0C671 652 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 RHOXF2BP0C7M4 288 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 SUPT20HL2P0C7V6 817 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 RSPH10BP0C881 870 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 SRGAP2CP0DJJ0 459 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ZBTB48P10074 688 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 CYP11B1P15538 503 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 SLC9A1P19634 815 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 POU3F2P20265 443 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 TNFAIP3P21580 790 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 UBA1P22314 1058 aaKnown RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 CTNNA2P26232 953 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 ATP5DP30049 168 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 NMT1P30419 496 aaKnown RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 HOXC12P31275 282 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 CDH5P33151 784 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 CD68P34810 354 aaPredicted RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 CTNNA1P35221 906 aaKnown RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 PTPN7P35236 360 aa1.77□□□□□ -2.13
LGR5-205ENST00000549015 RDXP35241 583 aaKnown RBP1.77□□□□□ -2.13
LGR5-205ENST00000549015 ACTN2P35609 894 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms