RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 CIPCQ9C0C6 399 aa5.54□□□□□ -1.52
CNOT2-215ENST00000548863 TFCP2L1Q9NZI6 479 aa5.54□□□□□ -1.52
CNOT2-215ENST00000548863 XPR1Q9UBH6 696 aa5.54□□□□□ -1.52
CNOT2-215ENST00000548863 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
CNOT2-215ENST00000548863 CNTNAP2Q9UHC6 1331 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 FAM90A10PA6NDY2 464 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 DSCR3O14972 297 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 PDE8BO95263 885 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 GRPP07492 148 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 WNT3P56703 355 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 SATB1Q01826 763 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 SRSF1Q07955 248 aaKnown RBP eCLIP5.53□□□□□ -1.52
CNOT2-215ENST00000548863 MYO1EQ12965 1108 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 LRRC41Q15345 812 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 RNASE12Q5GAN4 147 aaKnown RBP5.53□□□□□ -1.52
CNOT2-215ENST00000548863 SHC4Q6S5L8 630 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 OSCP1Q8WVF1 389 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 MARK4Q96L34 752 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 MESP1Q9BRJ9 268 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 MED16Q9Y2X0 877 aa5.53□□□□□ -1.52
CNOT2-215ENST00000548863 IGKV2D-30A0A075B6S6 120 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 H3BUI4 141 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 OAZ2O95190 189 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 THP07101 528 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 RBMS2Q15434 407 aaKnown RBP5.52□□□□□ -1.53
CNOT2-215ENST00000548863 CYP1B1Q16678 543 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 FAM187BQ17R55 369 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 SERPINA13PQ6UXR4 307 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 BCDIN3DQ7Z5W3 292 aaKnown RBP5.52□□□□□ -1.53
CNOT2-215ENST00000548863 SFTPA1Q8IWL2 248 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 SLC15A3Q8IY34 581 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 ABRAQ8N0Z2 381 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 SLC35A4Q96G79 324 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 CXorf36Q9H7Y0 433 aa5.52□□□□□ -1.53
CNOT2-215ENST00000548863 WASHC2CQ9Y4E1 1318 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 hCG_1984214I3L0E3 225 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 XRCC6P12956 609 aaKnown RBP eCLIP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 PRF1P14222 555 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 DGKEP52429 567 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 ZNF268Q14587 947 aaPredicted RBP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 TMEM63BQ5T3F8 832 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 DEF8Q6ZN54 512 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 IZUMO1Q8IYV9 350 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 PRPF38AQ8NAV1 312 aaKnown RBP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 PCSK9Q8NBP7 692 aaKnown RBP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 CUL5Q93034 780 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 CDK5RAP3Q96JB5 506 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 SARS2Q9NP81 518 aaKnown RBP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 TRMT13Q9NUP7 481 aaKnown RBP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 ASIC5Q9NY37 505 aa5.51□□□□□ -1.53
CNOT2-215ENST00000548863 MRPS17Q9Y2R5 130 aaKnown RBP5.51□□□□□ -1.53
CNOT2-215ENST00000548863 TTC3P53804 2025 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 FER1L4A9Z1Z3 1794 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 AKAP5P24588 427 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 AMPD3Q01432 767 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 GHRHRQ02643 423 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 KHDC1LQ5JSQ8 128 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 DEPDC1Q5TB30 811 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 PIP4P1Q86T03 277 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 CAND1Q86VP6 1230 aaKnown RBP5.5□□□□□ -1.53
CNOT2-215ENST00000548863 GAS2L3Q86XJ1 694 aa5.5□□□□□ -1.53
CNOT2-215ENST00000548863 DPCDQ9BVM2 203 aaPredicted RBP5.5□□□□□ -1.53
CNOT2-215ENST00000548863 TMEM232C9JQI7 657 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 SNUPNO95149 360 aaKnown RBP5.49□□□□□ -1.53
CNOT2-215ENST00000548863 FGAP02671 866 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 FPR3P25089 353 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 KCNJ5P48544 419 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 SLC11A2P49281 568 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 ALDH5A1P51649 535 aaPredicted RBP5.49□□□□□ -1.53
CNOT2-215ENST00000548863 UCP3P55916 312 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 E2F1Q01094 437 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 TRIM71Q2Q1W2 868 aaKnown RBP5.49□□□□□ -1.53
CNOT2-215ENST00000548863 MEPCEQ7L2J0 689 aaKnown RBP5.49□□□□□ -1.53
CNOT2-215ENST00000548863 ZNF280BQ86YH2 543 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 MTFMTQ96DP5 389 aaKnown RBP5.49□□□□□ -1.53
CNOT2-215ENST00000548863 MVB12AQ96EY5 273 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 SIGLEC11Q96RL6 698 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 PRR25Q96S07 402 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 EFHD1Q9BUP0 239 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 ASPSCR1Q9BZE9 553 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 AMFRQ9UKV5 643 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 PCDHA6Q9UN73 950 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 TMX2Q9Y320 296 aa5.49□□□□□ -1.53
CNOT2-215ENST00000548863 PRR23D1E9PI22 279 aaPredicted RBP5.48□□□□□ -1.53
CNOT2-215ENST00000548863 ABLIM3O94929 683 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 PRR23D2P0DMB1 279 aaPredicted RBP5.48□□□□□ -1.53
CNOT2-215ENST00000548863 PHKG2P15735 406 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 KCNA3P22001 575 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 ZIK1Q3SY52 487 aaPredicted RBP5.48□□□□□ -1.53
CNOT2-215ENST00000548863 MGAT5BQ3V5L5 792 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 LEXMQ3ZCV2 418 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 SIRT6Q8N6T7 355 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 ADAMTS15Q8TE58 950 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 PNISRQ8TF01 805 aaKnown RBP5.48□□□□□ -1.53
CNOT2-215ENST00000548863 CCDC17Q96LX7 622 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 GTPBP4Q9BZE4 634 aaKnown RBP5.48□□□□□ -1.53
CNOT2-215ENST00000548863 GAR1Q9NY12 217 aaKnown RBP5.48□□□□□ -1.53
CNOT2-215ENST00000548863 WWOXQ9NZC7 414 aa5.48□□□□□ -1.53
CNOT2-215ENST00000548863 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms