RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 SLCO2A1Q92959 643 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 SUSD3Q96L08 255 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 SYT15Q9BQS2 421 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 COLEC11Q9BWP8 271 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 MRPL9Q9BYD2 267 aaKnown RBP14.12□□□□□ -0.15
PTCH1-215ENST00000547672 DDX47Q9H0S4 455 aaKnown RBP14.12□□□□□ -0.15
PTCH1-215ENST00000547672 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 RRN3Q9NYV6 651 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 DMGDHQ9UI17 866 aaKnown RBP14.12□□□□□ -0.15
PTCH1-215ENST00000547672 PCDHB8Q9UN66 801 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 INPP5FQ9Y2H2 1132 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 FRMPD3Q5JV73 1810 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 FAM170AA1A519 330 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 CASTOR2A6NHX0 329 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 C2CD4BA6NLJ0 364 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 F8VP50 259 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 ENPP3O14638 875 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 KRT1P04264 644 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 ADORA2BP29275 332 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 RFC2P35250 354 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 COILP38432 576 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-215ENST00000547672 PTPN9P43378 593 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 SLC7A5Q01650 507 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 ELAVL2Q12926 359 aaKnown RBP14.11□□□□□ -0.15
PTCH1-215ENST00000547672 PDK2Q15119 407 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 TFDP3Q5H9I0 405 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 CCDC137Q6PK04 289 aaKnown RBP14.11□□□□□ -0.15
PTCH1-215ENST00000547672 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 C4orf50Q6ZRC1 276 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 CEP128Q6ZU80 1094 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 FAM183BPQ6ZVS7 135 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 DCP1BQ8IZD4 617 aaKnown RBP14.11□□□□□ -0.15
PTCH1-215ENST00000547672 SIX6OS1Q8N1H7 587 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 GOLGA6L1Q8N7Z2 621 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 KCTD6Q8NC69 237 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 TEKT4Q8WW24 435 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 RXFP2Q8WXD0 754 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 IFT81Q8WYA0 676 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 CAVIN3Q969G5 261 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 LRRC45Q96CN5 670 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 ERP44Q9BS26 406 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 MAK16Q9BXY0 300 aaKnown RBP14.11□□□□□ -0.15
PTCH1-215ENST00000547672 TRIM7Q9C029 511 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 AMACRQ9UHK6 382 aa14.11□□□□□ -0.15
PTCH1-215ENST00000547672 MEIS3P2A8K0S8 358 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 HSF2BPO75031 334 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 ECEL1O95672 775 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 ALDH2P05091 517 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 RARAP10276 462 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 TNNT3P45378 269 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 MARCKSL1P49006 195 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 RGS7P49802 495 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 TAS2R40P59535 323 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 HTRA3P83110 453 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 CAV1Q03135 178 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 TFDP2Q14188 446 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 HSP90B2PQ58FF3 399 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 ALS2CLQ60I27 953 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 OVOS1Q6IE37 1185 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 DRICH1Q6PGQ1 229 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 OLFML1Q6UWY5 402 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 CTU1Q7Z7A3 348 aaKnown RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 RTN4RL1Q86UN2 441 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 PSTKQ8IV42 348 aaKnown RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 SCUBE3Q8IX30 993 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 FUKQ8N0W3 1084 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 PRELID2Q8N945 189 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 CMASQ8NFW8 434 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 SEC14L1Q92503 715 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 SMARCD1Q96GM5 515 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 FUT8Q9BYC5 575 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 CRISPLD2Q9H0B8 497 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 DPEP3Q9H4B8 488 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 PNPLA8Q9NP80 782 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 RNF19AQ9NV58 838 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 USP18Q9UMW8 372 aa14.1□□□□□ -0.15
PTCH1-215ENST00000547672 DRG1Q9Y295 367 aaKnown RBP14.1□□□□□ -0.15
PTCH1-215ENST00000547672 LRRD1A4D1F6 860 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 ZNF487B1APH4 448 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 MAP2K7O14733 419 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 SYN3O14994 580 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 LRCH4O75427 683 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 TADA2AO75478 443 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 ZNF189O75820 626 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 TRUB2O95900 331 aaKnown RBP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 RALAP11233 206 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 CCDC130P13994 396 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 DSC1Q08554 894 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 SMARCB1Q12824 385 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 HLTFQ14527 1009 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 MBTPS1Q14703 1052 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 PPP1R7Q15435 360 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 MDH1BQ5I0G3 518 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 LLGL2Q6P1M3 1020 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 FBXO46Q6PJ61 603 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 SPOCD1Q6ZMY3 1216 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 OSTM1Q86WC4 334 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms